Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2935 ATGGGTTCAAGCACTGCCACCAAACAACCACCGCCCTCCTCTCCTACAATCTCCTCATCCTCCACTTCTTCTTCCTCTGCGAGTCCGAAGAAGGGTAGGGGTGGATCATTTAACCGTGCTCAGCCACCAAGGTGCCAGATTGAAGGTTTGCAAAGCAGATTTGAGTGGTGCAAAGGCTTACTTACTGTTCTTGGGCATAAAGTGTGTGGCATGCAGTCCAAATCACCTACAGTCATTGCAGCTGGCCTCCAACAAAAGTTTTTCCAACAGTGTAGCAGGGGTGGGGACGAGACGCAGCAACGACGGAGGAGAAGGAGGGGTCGAGACAGCTTCGTGGTGATGGTGGTGCTCTTGGTGGTGGAAGAAGAGAACAATGATGGTGATTGGGGATCGTGGTAG 399 0.5213 MGSSTATKQPPPSSPTISSSSTSSSSASPKKGRGGSFNRAQPPRCQIEGLQSRFEWCKGLLTVLGHKVCGMQSKSPTVIAAGLQQKFFQQCSRGGDETQQRRRRRRGRDSFVVMVVLLVVEEENNDGDWGSW* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2935 132 Gene3D - 35 118 IPR036893 GO:0003677|GO:0005634
Dod01g2935 132 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17 17 95 - -
Dod01g2935 132 SUPERFAMILY SBT domain 43 97 IPR036893 GO:0003677|GO:0005634
Dod01g2935 132 MobiDBLite consensus disorder prediction 1 32 - -
Dod01g2935 132 MobiDBLite consensus disorder prediction 1 44 - -
Dod01g2935 132 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 17 95 IPR044817 GO:0003677
Dod01g2935 132 ProSiteProfiles Zinc finger SBP-type profile. 42 121 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2935 Dod-Chr1 69795341 69796442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2935 30 93 SBP-box Gene Family AT1G02065 45.312 2.06e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2935 - - gmx:100780949 82.8037