Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2925 ATGGGCAAGAAAATGAAGCTTCTTCCCTCCCTTCTCAAGAACACCGAAGTTAAAAAGTCTTCATCTTCTTGGCCTTGGCCATCTTGTCACCAACCCAAAACCCTCTCTTTCAGAGCCAACAACGACATCTTCAAGACCATTAACTCAGCCTACTTTGATGGCACCACAACCGTGGAAGTTCTTGAGATAAGCTCTGAATCCTTTTTCACTGTATCCCCTGATGACGACTCTGCTAGCTTCTCAACCAATGCCTCTGATGAGGATTCAACAAGAAGAGATCAGGACTCAATAGAGACCGTGATTCGCGGGTTGCGTTCTGACCGTTTGTTCTTCGAGGCAGATGAGACCAGCTCCATCTTAGAGTCCAAAGCGCCAGCACCCGCAGGAGGAGGAGCAGGAGCAGAAGCAGCTACAACCTTGCCATTCAAAGACAGCGTGGTGCTTTCCATGGATTCCCAAGACCCATACGTTGACTTTCGAAAGTCCATGGAGGAGATGGTGGAGGCTCATGGCGTCAAGGACTGGGAGGGTCTCGAGAAGCTTCTGTGTTGGTACTTGAGGGTCAATGGGAAGACCAATCATGGTTATATTGTTGGGGCTTTCGTTGATTTGTTGGTTGCTCTAGCACTTGCTTCTGCTTCTGCTTCATCGACATCTTCCACTTCTTCTTCTTCCTATTCTCCTTCTTCTCCTTTGTCCTTTTATAGCTCTTCCATGTCTTCTTCTTGTAGCATTCGTTGTGTTTCTTGTTTGGAGGCCGAGGACGAGGTTGTTGATACTACTACTCCTAGTTCATCTTCCTTGTTGCAACAAGTTAAGGAGGAGATTAAAAATCAAGACGTACGAGGCTAG 852 0.4707 MGKKMKLLPSLLKNTEVKKSSSSWPWPSCHQPKTLSFRANNDIFKTINSAYFDGTTTVEVLEISSESFFTVSPDDDSASFSTNASDEDSTRRDQDSIETVIRGLRSDRLFFEADETSSILESKAPAPAGGGAGAEAATTLPFKDSVVLSMDSQDPYVDFRKSMEEMVEAHGVKDWEGLEKLLCWYLRVNGKTNHGYIVGAFVDLLVALALASASASSTSSTSSSSYSPSSPLSFYSSSMSSSCSIRCVSCLEAEDEVVDTTTPSSSSLLQQVKEEIKNQDVRG* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2925 283 MobiDBLite consensus disorder prediction 72 96 - -
Dod01g2925 283 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 5 254 IPR038933 GO:0045892
Dod01g2925 283 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 147 209 IPR006458 -
Dod01g2925 283 ProSiteProfiles OVATE domain profile. 148 207 IPR006458 -
Dod01g2925 283 Pfam Transcriptional repressor, ovate 152 208 IPR006458 -
Dod01g2925 283 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 5 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2925 Dod-Chr1 69710059 69711365 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod01g2925 Ovate 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2925 - - ahf:112754577 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2925 01 69710059 69711365 Dod06g0222 06 3232099 3233084 ECH
Dod01g2925 01 69710059 69711365 Dod01g2925 01 69710059 69711365 ECH
Dod01g2925 01 69710059 69711365 Dod07g0279 07 3488988 3489923 PCT