Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2901 ATGGAAAACATGCCACCGGGCTATCGTTTCTACCCTACGGAAGAGGAGCTGATTTCGTTCTATCTTCGCAACAAGCTTGAAGGCAGAGAGAGGGAGGACATGAACCGGGTTATACCAGAAGTTGATATATACCACTACAGTCCATCGGAACTCCCACAAATTTCAGGAGAGGCAAATCTGAGGGACACTGAGCAATGGTTCTTCTTCATTCCGAGGCAAGAAAGTGAAGCCCGAGGAGGGAGGCCAAAGCGGCTCACAAATACTGGGTACTGGAAAGCCACTGGCTCCCCTAATCACGTTTATTCTTCTGATAACCGCATCATCGGCATGAAAAGAACAATGGTTTTCTATAGCGGAAGAGCTCCAAACGGAAAGAAAACCGATTGGAAGATGAACGAGTACAAAGCCATCGATACCAAGTCCGAAGCGTCCTCTTCAAACAAGGCAGTTCCTATGTTAAGGCAGGAATTCAGCTTAAGCCGAGTGTACAAGAAATCAAAGTGTTTGAGGGCATTTGATAGAAGACCACCTCCAAGGAGTGATACATATCCTAGTGTTCAAAATGCTCAAGAGAACCAGAAGGGTTCAACATCTTACTCTCAACATAACACTTCTCAAATGGGGGAGAGATCAGGTGCGGCGAGCTCACCAGATAGTTCATGCTCTGAAGATCACCATGGACAATGTTCTTACAGTGGTCAAATGGATCTTGACACCGAGCCTTTGTTGAATTGGGAGCAAGTGGATTGGTTCTTGGGATCACCGAAACCATGA 774 0.4625 MENMPPGYRFYPTEEELISFYLRNKLEGREREDMNRVIPEVDIYHYSPSELPQISGEANLRDTEQWFFFIPRQESEARGGRPKRLTNTGYWKATGSPNHVYSSDNRIIGMKRTMVFYSGRAPNGKKTDWKMNEYKAIDTKSEASSSNKAVPMLRQEFSLSRVYKKSKCLRAFDRRPPPRSDTYPSVQNAQENQKGSTSYSQHNTSQMGERSGAASSPDSSCSEDHHGQCSYSGQMDLDTEPLLNWEQVDWFLGSPKP* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2901 257 SUPERFAMILY NAC domain 2 165 IPR036093 GO:0003677|GO:0006355
Dod01g2901 257 ProSiteProfiles NAC domain profile. 4 165 IPR003441 GO:0003677|GO:0006355
Dod01g2901 257 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 250 - -
Dod01g2901 257 MobiDBLite consensus disorder prediction 181 235 - -
Dod01g2901 257 MobiDBLite consensus disorder prediction 169 235 - -
Dod01g2901 257 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 250 - -
Dod01g2901 257 Gene3D NAC domain 13 169 IPR036093 GO:0003677|GO:0006355
Dod01g2901 257 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2901 Dod-Chr1 69442243 69444321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2901 7 250 NAC Transcription Factor Family AT5G22380 50.000 6.57e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod01g2901 NAM 7.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2901 - - gmx:100800056 365.925