Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2886 ATGGATACATCAAATCCTGCAGTGTTTGTCAATGCAGAAATGTTGCACTTTTATGTTGGAAGGAGGGTTCGGGCAGTGATGCAGGTTGTGCGATCCGACGGTGGAGTTGTCATTGGAAAATCAACAGATGATAAGCAACTAGTTGTAAAAGGACCACTGCCACCTTCTTCGCTTACAACTTTTGTAGAAGTTATTGGTATTGTTGACAGTGATAAATCCATTCGGGCTGAGACATGGACCAATTTTGGTGATGCAATTGGTATTGTTTTTCCATCACATTCGATTGCACAGATTGGTTGTCATGTTGGTTTTTCTGCTAAGACTGAATCATGTGAAATACTTTTATATGATTATTTTTTTATTGAAATTCCTGAGTACATGAAGCTTTGTATTCTGAGGAGTTTTTTCTCCCCCTTTTCGCAGATATGGTTAGCTACAATAAGCTTTGTCAGCTTGCAAATGGAGAATTTAAGCACTTGTTTGTATGAGGTACAACAAGCTCATCTGATGATATGA 516 0.3837 MDTSNPAVFVNAEMLHFYVGRRVRAVMQVVRSDGGVVIGKSTDDKQLVVKGPLPPSSLTTFVEVIGIVDSDKSIRAETWTNFGDAIGIVFPSHSIAQIGCHVGFSAKTESCEILLYDYFFIEIPEYMKLCILRSFFSPFSQIWLATISFVSLQMENLSTCLYEVQQAHLMI* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2886 171 CDD RPA3 6 84 - -
Dod01g2886 171 SUPERFAMILY Nucleic acid-binding proteins 6 84 IPR012340 -
Dod01g2886 171 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 89 - -
Dod01g2886 171 Gene3D - 2 90 IPR012340 -
Dod01g2886 171 Pfam Replication factor A protein 3 1 86 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2886 Dod-Chr1 69328012 69330644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2886 1 88 Core DNA Replication Machinery Family AT4G18590 64.045 8.99e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2886 K10740 - gmx:100306641 137.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2886 01 69328012 69330644 Dod07g0539 07 7177504 7186464 PCT