Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2879 ATGCAAACCGTTGATTCACATAATGAGGAACAAAAGTATAGAGTACGAAAATTAGAGGTCTCAGACAAGGCCAAAGGTTTTATAGAGCTACTGCAACAACTTAGTGTGTGTGACTCTGTCTCTGACAAGGAATTCGAGGGTAGATTTCATGAGCTCAGTTCCCTTGGAGATGACCACGTTATCAGCGTCATGGAAGATGAAGTTTCTGCAAAGATCGTCGCAACAGGGAGTGTGTTCATTGAGAAGAAGTTTCTGAGAAACTGTGGCAAGGTAGGGCACATTGAGGATGTTGTTGTGGATTCTAGCACGCGGGGAAAGCAACTGGGAAAGAAGATAATCAACTTCCTCACAGATCATGCTCGTTCAGTGGGGTGCTATAAGGTCATTCTTGATTGCAGCCTTGACAACAAGGCCTTCTACGAGAAATGTGGTTTCAAGCAGAAAGAAATTCAGATGGTTAAATATTTTATTTGA 474 0.4241 MQTVDSHNEEQKYRVRKLEVSDKAKGFIELLQQLSVCDSVSDKEFEGRFHELSSLGDDHVISVMEDEVSAKIVATGSVFIEKKFLRNCGKVGHIEDVVVDSSTRGKQLGKKIINFLTDHARSVGCYKVILDCSLDNKAFYEKCGFKQKEIQMVKYFI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2879 157 Pfam Acetyltransferase (GNAT) family 43 145 IPR000182 GO:0016407
Dod01g2879 157 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 5 153 IPR039143 GO:0004343|GO:0006048
Dod01g2879 157 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 12 156 IPR016181 -
Dod01g2879 157 CDD NAT_SF 67 131 - -
Dod01g2879 157 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 13 157 IPR000182 GO:0016407
Dod01g2879 157 Gene3D - 10 157 - -
Dod01g2879 157 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 5 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2879 Dod-Chr1 69255484 69257091 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dod01g2879 Acetyltransf_1 2.2e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2879 K00621 - jre:108979803 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2879 01 69255484 69257091 Dod01g2879 01 69255484 69257091 ECH