Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2871 ATGGTGGTGCAGGAATCGGAGATGAACAACCTCTTACAAGGAGAGGTGGAGTCACAGCTCCAAACGGAACAAGAAGCCAACAAGCTGAACAACAACAACAACAACCCGTTCTCATCTCTGGGAAGGCAATCATCCATATACTCTCTCACACTTGATGAGTTCCAGCACACCCTCTGCGACACCGGCAAGAACTTCGGCTCCATGAACATGGACGAGTTCCTCAGCAGCATCTGGAACGCCGAAGAGAACCAAGCCGCCGTAACCAACAACACCACCACCAACAACAACATCAACAACAACAATAACAACATGTCTCTGAATAACGAAGCTTCTTCCACTGATAGAGGGATGATGATAAGGAAGCAGCCAAGCCTCCCTCGGCAAGGCTCGCTAACCCTTCCTGCACCTCTTTGTAGGAAAACCGTGGAAGAAGTTTGGTCTGAGATACACAAAGGACAACAATCCCAGCAGCAGCAGCATCAGAATAAGAGCAACGACAATGCCCCTAGTAATAACAACAATGGAAGAAGTAGCAGTGTTCAGAATAATACCGAAACTGCTCCTCGCCAACCCACCTTTGGGGAGATGACTTTGGAGGATTTCTTGGTAAAAGCAGGGGTAGTTCGGGAACCATGTGCAATGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCTGCAGCTGCGGCTAATTCTCATCAGCAGTATATGGGGGTGTACGGGAGTAACAACACTACAATGGGTCCTGCTTCTTTTGTTGGAATTAGGCCTGTGATTGGTGGTGGCGGAGTGGGGAGTGTGGTTGCGCCGCCTTATCAAGGTGGGGAGCCTTCAGGAGGTTATGGTGGGAATAATGGTGGTGGGAAGAGGGATGGTGCAGGGTATCCTCCTGGTGGTGGTGGAGTGGGTGGGGTATGCTCGTATGGAGGGAGGGTGGTGAATGGAGGAGGGGGTGGGTATGGGGTGGGGCCCAGTCCCACTCTGGGGATGGGTGGGCCCTTGAGCCCGGATTCATCGGATGGGGTTGAGATGATGGGCCTGTTGAGGGGGAGGAAGAGGATGGTTGGTGGTCCCGTCGAGAAAGTGGTCGAGAGAAGGCAGAGGAGGATGATCAAGAACAGGGAATCGGCAGCCAGGTCTAGAGCCAGAAAACAGGCATACACAGTTGAACTAGAAGCAGAACTGAACCAACTAAGGGAGGAGAACGCCCAACTGAAACAAGCACTGGCCGACCTCGAGAGGACAAGAAGGCAACAGTGTTCTGAGGATATGAACGTGAGAGTTCAAGCCAGAGCTCATAAGGCAACAGAGAAATTGAGAGGCCTGAGAAGGAACCTAAGTTGTCCTTTGTGA 1353 0.5203 MVVQESEMNNLLQGEVESQLQTEQEANKLNNNNNNPFSSLGRQSSIYSLTLDEFQHTLCDTGKNFGSMNMDEFLSSIWNAEENQAAVTNNTTTNNNINNNNNNMSLNNEASSTDRGMMIRKQPSLPRQGSLTLPAPLCRKTVEEVWSEIHKGQQSQQQQHQNKSNDNAPSNNNNGRSSSVQNNTETAPRQPTFGEMTLEDFLVKAGVVREPCAMPAAAAAAAAAVPAAAANSHQQYMGVYGSNNTTMGPASFVGIRPVIGGGGVGSVVAPPYQGGEPSGGYGGNNGGGKRDGAGYPPGGGGVGGVCSYGGRVVNGGGGGYGVGPSPTLGMGGPLSPDSSDGVEMMGLLRGRKRMVGGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENAQLKQALADLERTRRQQCSEDMNVRVQARAHKATEKLRGLRRNLSCPL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2871 450 Coils Coil 381 422 - -
Dod01g2871 450 MobiDBLite consensus disorder prediction 90 112 - -
Dod01g2871 450 MobiDBLite consensus disorder prediction 148 191 - -
Dod01g2871 450 CDD bZIP_plant_BZIP46 365 419 - -
Dod01g2871 450 Gene3D - 363 420 - -
Dod01g2871 450 Pfam bZIP transcription factor 365 417 IPR004827 GO:0003700|GO:0006355
Dod01g2871 450 Coils Coil 425 445 - -
Dod01g2871 450 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 368 383 IPR004827 GO:0003700|GO:0006355
Dod01g2871 450 SUPERFAMILY Leucine zipper domain 365 415 IPR046347 GO:0003700|GO:0006355
Dod01g2871 450 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 6 449 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Dod01g2871 450 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 6 449 IPR043452 GO:0003700|GO:0045893
Dod01g2871 450 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 363 414 IPR004827 GO:0003700|GO:0006355
Dod01g2871 450 MobiDBLite consensus disorder prediction 148 193 - -
Dod01g2871 450 SMART brlzneu 361 425 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2871 Dod-Chr1 69192378 69198410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2871 1 420 bZIP Transcription Factor Family AT2G36270 48.366 6.19e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod01g2871 bZIP_1 2.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2871 K14432 - gmx:100790948 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2871 01 69192378 69198410 Dod01g2871 01 69192378 69198410 ECH
Dod01g2871 01 69192378 69198410 Dod07g0240 07 3132682 3134030 PCT