Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2863 ATGGCGGAAGAGCACCGATGCCAAGCTCCGGAAGGCCACCGGCTCTGCGCCAACAACTGCGGCTTCTTCGGCAGCTCGGCCACCATGAACCTCTGCTCAAAGTGCTACAGAGACGTCCTATTGAAGGAGCGAGAACAAGCCAAAACCAAATCCACCATTGAAACCGCCCTCTCCTCCTCCGCAACATCTCCTCCTAAGACGACGCCGCCACCCTCGCTCCCGGCCGTTGAACCCCTCCCTCAACAGCCGCTCCTCGCCTCGCCGGAAATCGCGGCGGAATCCTCGGGATCCGCGTCCGGACAGGCCGTTGCCGCGGCGGTTCAGCCGAACCGGTGCACGACGTGCAGGAAGCGAGTCGGTCTGACCGGGTTCAAGTGCAGGTGCGGGACCACGTTTTGCGGGGCCCACAGGTACCCGGAGAAGCATGGGTGCGGGTTCGATTTCAAGTCGGTTGGGAGAGAAGAAATAGCGAGGGCCAACCCCGTCATCAAAGCTGAGAAGCTCGACAAGATTTGA 516 0.6143 MAEEHRCQAPEGHRLCANNCGFFGSSATMNLCSKCYRDVLLKEREQAKTKSTIETALSSSATSPPKTTPPPSLPAVEPLPQQPLLASPEIAAESSGSASGQAVAAAVQPNRCTTCRKRVGLTGFKCRCGTTFCGAHRYPEKHGCGFDFKSVGREEIARANPVIKAEKLDKI* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2863 171 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Dod01g2863 171 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Dod01g2863 171 Pfam AN1-like Zinc finger 112 148 IPR000058 GO:0008270
Dod01g2863 171 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Dod01g2863 171 Gene3D - 1 65 - -
Dod01g2863 171 SUPERFAMILY AN1-like Zinc finger 104 166 IPR035896 -
Dod01g2863 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 57 - -
Dod01g2863 171 MobiDBLite consensus disorder prediction 64 78 - -
Dod01g2863 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 171 - -
Dod01g2863 171 PANTHER BNAC06G14100D PROTEIN 1 171 - -
Dod01g2863 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Dod01g2863 171 MobiDBLite consensus disorder prediction 48 93 - -
Dod01g2863 171 Gene3D - 87 167 IPR035896 -
Dod01g2863 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2863 Dod-Chr1 69065379 69067627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2863 1 171 C2H2 Transcription Factor Family AT3G52800 54.802 2.23e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2863 - - gmx:100789686 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2863 01 69065379 69067627 Dod01g2863 01 69065379 69067627 ECH
Dod01g2863 01 69065379 69067627 Dod07g0231 07 3044992 3047182 PCT