Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2857 ATGTTCATGATGGACTCGCACAAGCAACTCTTTCCCCTCCTCTCTCTTTTCCTAATTCTACGTCTCTCAGGACAAAGGGTGGTGGTTCAAGCAGAGGCTAGCCTTGAGCATCCCCATCAGCTTAATGACACTACCCCAAAGAAACTGTTCGTTTTTGGAGATTCATATGCTGACACGGGCAACATCAGAAAAGGTCTCTCTAATTCCTGGAAAGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGCCGCTTCTCCGACGGCAGAGTCCTCACCGACTACATTGCAAAGTATCTGAGAGTGAAATCGCCAGTACCATACAGATTGAGGAGACTGATGCCCCAACACCTGAAATATGGGATGAACTTTGCGTTCGGTGGGACGGGTGTGTTTGACACGTCGGTTCCAGCGCCAAACATGACAACACAGATCGATTTGTTGGAGCGGCTGCTCACCCAAAAAGACAAATTGTACACCGCCTCCGACCTCTCCAACTCGGTGGCCCTCCTCTCTGTCGCTGGAAATGACTACAGCCATTACTTGGCCTCAAACGGCTCTTCTCAGGGCTTACCATTATTCGTTGCCTCAGTGGTTAATCAAACAATCACCAATCTGATTCGCATCGAAGCGTTGGGAGTGAAGAAGATTGTTGTGGGTGGCCTACAACCCCTCGGATGCCTTCCTCAGATGACAGCCGCATCCTCATTCCAGCGCTGCAATACTTCCTCCAACGCCCTCGTGCTTCTCCACAACAGCCTCTTGAACCAGGCAGTGACAAGGCTGAACCAACAAACCAAGTACCATTCTTCCTTCATCGTTCTCGACCTTTTCGACAGCTTCATGTCGGTTCTGAACCACCCTTCCACCCACAACATTCAGAATCAGTTGACGCCGTGCTGCGTTGGCATGAGCAGTAATTATTCTTGTGGGAGTGTGGACCAGAACATGGTGAAGAAGTATAGGGTGTGTGATGATCCGAAATCGGCTTTCTTTTGGGACCTGGTGCACCCAACGCAAGCAGGGTGGCACGCCGTGTATAACAAGTTGCGAACCATGAATGCGCTTCAACAAATTCAATTCTAG 1086 0.5037 MFMMDSHKQLFPLLSLFLILRLSGQRVVVQAEASLEHPHQLNDTTPKKLFVFGDSYADTGNIRKGLSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLRVKSPVPYRLRRLMPQHLKYGMNFAFGGTGVFDTSVPAPNMTTQIDLLERLLTQKDKLYTASDLSNSVALLSVAGNDYSHYLASNGSSQGLPLFVASVVNQTITNLIRIEALGVKKIVVGGLQPLGCLPQMTAASSFQRCNTSSNALVLLHNSLLNQAVTRLNQQTKYHSSFIVLDLFDSFMSVLNHPSTHNIQNQLTPCCVGMSSNYSCGSVDQNMVKKYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNALQQIQF* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2857 361 CDD SGNH_plant_lipase_like 49 350 IPR035669 -
Dod01g2857 361 Pfam GDSL-like Lipase/Acylhydrolase 49 349 IPR001087 GO:0016788
Dod01g2857 361 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 360 - -
Dod01g2857 361 SUPERFAMILY SGNH hydrolase 46 350 - -
Dod01g2857 361 PANTHER OSJNBB0059K02.9 PROTEIN 3 360 - -
Dod01g2857 361 Gene3D SGNH hydrolase 39 360 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2857 Dod-Chr1 68961996 68967069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2857 42 346 Pollen Coat Proteome AT1G75930 27.679 7.05e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2857 - - gmx:100788092 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2857 01 68961996 68967069 Dod07g0225 07 2905822 2937667 PCT