Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2851 ATGAAGGTCATCGCCGCATACTTGCTCGCCGTCCTCGGTGGCAACACCTGCCCTTCCGCCGATGACATCAAGGACATCCTCGGCTCCGTTGGAGCCGAAGCCGACGATGACAGGATCTCGCTCCTTTTGTCTGAAGTGAAAGGCAAAGACATTGCAGAGGTTATCGCCGCCGGAAGAGAAAAGCTTGCATCAGTGCCTGCTGGTGGTGGTGGCGCCGTCGCGGTTGCCGCTGCTCCTGGCGGAGGCGGTGGCGGTGGCGCTGCAGCTCCCGCAGCCGCCGAGGCTAAGAAGGAGGAGAAGGTTGAAGAGAAGGAGGAATCTGATGATGATATGGGATTCAGTCTCTTTGATTAA 354 0.5819 MKVIAAYLLAVLGGNTCPSADDIKDILGSVGAEADDDRISLLLSEVKGKDIAEVIAAGREKLASVPAGGGGAVAVAAAPGGGGGGGAAAPAAAEAKKEEKVEEKEESDDDMGFSLFD* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2851 117 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 117 - -
Dod01g2851 117 MobiDBLite consensus disorder prediction 81 117 - -
Dod01g2851 117 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 117 IPR044076 GO:0002182|GO:0003735|GO:0022625
Dod01g2851 117 CDD Ribosomal_P2 1 117 IPR044076 GO:0002182|GO:0003735|GO:0022625
Dod01g2851 117 Gene3D - 1 59 IPR038716 -
Dod01g2851 117 Hamap 50S ribosomal protein L12 [rpl12]. 2 117 IPR027534 GO:0003735|GO:0005840|GO:0006414
Dod01g2851 117 Pfam 60s Acidic ribosomal protein 18 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2851 Dod-Chr1 68879439 68880257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2851 1 117 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 65.812 1.84e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2851 K02943 - tcc:18590363 137.117