Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2844 ATGGACTTCAATCTAAAACAATGGAGAAACCACCAGCATGAGTCAGAGGAACAACATTCTACAAAAATGCCAAAACTTCTCCCAGAATCCCATCATCAACAGCCACAATCAGCTGCCTCGTCTGCTCTCCCCTTCTTTGTACCTGAACCCAATAGCAACAAAGTCAGCACCCTGTCAGATTCAACACTAGCTAATACTAACAGCAGATTTCCCAGAATGGGGAGTTATTTCAGCTTGGTACAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATATTCAGGTACATGCTGGTCGGTGCTGCTGTTCCTCCTGAGCTCCTTCAACCAATCAAGAAAAGCCTCATCCATTCCCCTCCCTATTTCCTCCACCACCCTCTCCAACATTATCAACCTGCTGCAGCAGCTATGTTGCAATCAGGGTATTGGGGGAGAGCAGCCATGGATCCGGAGCCGGGGCGTTGCCGGAGGACGGACGGGAAGAAGTGGCGGTGCTCGAGGGACGTGGTGGCAGGTCAGAAGTACTGCGAGCGCCACATGCACAGAGGCCGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAACCAGTGCTGGAGGTGGTGCAACTTTAGGTGCTTCTTCATCTTCCATTTCTTCACCGCCTCTTGCTACTGCCTCATTGAAATCCCCTTTTGATCTCCTTCACCTCAATGACCGTACCTCTGGGATCAAGGATGAAAACAAGGGCTTGTTTGAAAACCAAGATCATCATCATGTGGGTGGGGATGGCAGATCAGGCGGGCACATGCTGAGGCATTTCTTTGATGATTGGCCAAGATCACTGCAAGAGTCTGACAATGCTGAAAGCAATGCTGGGAGGATGAACTCGGCCACAAGCCTCTCTATTTCAATGCCCGGAAACACAAGTTCATCGGATGTGTCGTTGAAATTGTCCACTGGGTATGGAGAGGATCCGGGTCCGAGAAATGGGAATGTGGACCCGGAGGGAGAGTCAGAGCACCTGCAGTTAAATTGGGCTGGGGGGTGGACCTCGGCGAATCAAGTGGCTTCAATGGGAGGACCACTTGCTGAGGCACTCAGATCATCCACTTCCACTTCATCACCCACTAGCGTTCTGCACCAGTTGCCTCGTGGTTCTGCCTCTGAGACCAGCTTCATTAGCACCTAG 1167 0.5133 MDFNLKQWRNHQHESEEQHSTKMPKLLPESHHQQPQSAASSALPFFVPEPNSNKVSTLSDSTLANTNSRFPRMGSYFSLVQWQELELQALIFRYMLVGAAVPPELLQPIKKSLIHSPPYFLHHPLQHYQPAAAAMLQSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPTSAGGGATLGASSSSISSPPLATASLKSPFDLLHLNDRTSGIKDENKGLFENQDHHHVGGDGRSGGHMLRHFFDDWPRSLQESDNAESNAGRMNSATSLSISMPGNTSSSDVSLKLSTGYGEDPGPRNGNVDPEGESEHLQLNWAGGWTSANQVASMGGPLAEALRSSTSTSSPTSVLHQLPRGSASETSFIST* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2844 388 MobiDBLite consensus disorder prediction 1 40 - -
Dod01g2844 388 MobiDBLite consensus disorder prediction 177 211 - -
Dod01g2844 388 Pfam QLQ 77 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod01g2844 388 MobiDBLite consensus disorder prediction 357 388 - -
Dod01g2844 388 PANTHER GROWTH-REGULATING FACTOR 3 10 388 - -
Dod01g2844 388 MobiDBLite consensus disorder prediction 356 388 - -
Dod01g2844 388 Pfam WRC 148 190 IPR014977 -
Dod01g2844 388 MobiDBLite consensus disorder prediction 275 331 - -
Dod01g2844 388 PANTHER - 10 388 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dod01g2844 388 MobiDBLite consensus disorder prediction 276 310 - -
Dod01g2844 388 MobiDBLite consensus disorder prediction 1 26 - -
Dod01g2844 388 ProSiteProfiles WRC domain profile. 147 191 IPR014977 -
Dod01g2844 388 ProSiteProfiles QLQ domain profile. 76 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod01g2844 388 SMART QLQ_2 75 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2844 Dod-Chr1 68727943 68730822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2844 1 375 GRF Transcription Factor Family AT3G52910 50.128 5.49e-93 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dod01g2844 WRC 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2844 - - aip:107648821 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2844 01 68727943 68730822 Dod01g2844 01 68727943 68730822 ECH
Dod01g2844 01 68727943 68730822 Dod07g0213 07 2728087 2731346 PCT