Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2842 ATGGCTCACAAGTACTTACACGAGCTACTGAAGGAGGACCAAGAGCCATTCCTTTTAAACAAATACATATCCGATAGGAGGAGCAAGATCAAGAGGCCTTCCCAAAACACTAGTTTGCAACTCAAGAAACGGAAACCGCTCCATCATCGTCATCATCATCATCACAACAACAACTCAAGCTTCTTCCCAGCCGTGAACCTCTGCAAGAACGCGTGCCTCTTCTCCTTCCATGCCACTGACACCACGAAATCCCCACTCTTCGAATTGGCATCGCCAGCAGCTGCACCCAGAAGCCCCTGCAAGTCTCCCAACGCCATATTCCTCCACATCCCTTCTCGAACCGCTGCTCTTCTCCTCGAAGCCGCTCTCAGGATCCAGAAAAGCTCCAAAACCAATAAACACCAAAGCAAAACTAACAACGGGTTTGGCCTATTCGGCTCCTTTTTCAAGAGACTAACGCAACGGAACCAGAACCGCAAGAGGGAAGCAGAGTCAAAGGTTTCGGTCAAAGATGTATTGATGTGGGATTCCGCTGTGGGGCGAAGAAGAAGACTCCCCAATGGGAGCAGGAAAGAGCAAGAAAAGAAGGTTTATCAAATTGATAAGGACAACAACGTGGGTAATGCAAATGCATGCGAGATTATTGGAAGGGTTAGCAGTGCTGTTTGGTCGGAGAGCAACGAGGATAAGTCTCTGGGCATGGAAACCTCGAGTAGTACTAATAGTAGCCACTCTTATGATGGTGATGATGACTCTGATGATGAGATTATTGGTTTCGTGAACAATCAGAAACAACACGACGAAGCAGAGTGTTCTTGCTGCCACGATGATACCAATGGCTTCTGCGAAAGCCCGTTCCGTTTCGTTCTTCAACGGAGCCCCTCCTCCTCCGGCCGCAACACACCGGAGCTAGCTTCGCCGGCACCGTCACCGTCACCGTCACCGAGTCCCCACAGAACACAGGACAAAGAAAGTAATGGTGCAGAGAGCCTCAACAAATTCCAATCAGGGGAAGAAGAGGAAGACAAGGAACAGTGTAGCCCCGTGTCTGTTCTAGACCCACCCTTCGAGGACGATGACGAAAGGCATGGAAACGACGATGATGATGAAGAGGATGGCTTCGATTTGGAGTGCAGCTATGCCATTGTGCAGAGAGCTAAGCAGCAGCTGTTGTACAAGCTTCGTAGATTTGAGAAACTCGCAGAGTTAGATCCAGTAGAACTTGAGAAAACAATGCTGGATGAAGAAGAAGAGGACGAGAACGACACATTCATGGAAGAGGATGATGAGGATGATAGCGAAGTATCGTGTAAAGAAAATGACTTCAGAGAACTAGTCTTCGAGGCTCTGTGCCAGTCAAGTGTCCATGACAGGCTACAAACCCCTGAAGGCCTTAAGAAACTTGTTTCTGATCTCATTGTGGAGGAAAGGAGAGAACTGAATTCAGTGGAAGACAGGGACATGGTGGTAAGAAAGGTATGCAAGAGGCTGGAATTGTGGAAAGAAGTGGAGTCTAACACAATTGACATGATGATAGAAGAGGACTTCTCTAGAGAGAATGTTGGGTGGAAGAAAAATGTGGAGCAGAGAAGAGACATGGCTGTGGAGCTTGAGCTTGCTATCTTTGGCTTTCTAGTGGAGGAGTTTTCAGAGGAACTTGAATGTTAA 1668 0.4778 MAHKYLHELLKEDQEPFLLNKYISDRRSKIKRPSQNTSLQLKKRKPLHHRHHHHHNNNSSFFPAVNLCKNACLFSFHATDTTKSPLFELASPAAAPRSPCKSPNAIFLHIPSRTAALLLEAALRIQKSSKTNKHQSKTNNGFGLFGSFFKRLTQRNQNRKREAESKVSVKDVLMWDSAVGRRRRLPNGSRKEQEKKVYQIDKDNNVGNANACEIIGRVSSAVWSESNEDKSLGMETSSSTNSSHSYDGDDDSDDEIIGFVNNQKQHDEAECSCCHDDTNGFCESPFRFVLQRSPSSSGRNTPELASPAPSPSPSPSPHRTQDKESNGAESLNKFQSGEEEEDKEQCSPVSVLDPPFEDDDERHGNDDDDEEDGFDLECSYAIVQRAKQQLLYKLRRFEKLAELDPVELEKTMLDEEEEDENDTFMEEDDEDDSEVSCKENDFRELVFEALCQSSVHDRLQTPEGLKKLVSDLIVEERRELNSVEDRDMVVRKVCKRLELWKEVESNTIDMMIEEDFSRENVGWKKNVEQRRDMAVELELAIFGFLVEEFSEELEC* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2842 555 MobiDBLite consensus disorder prediction 414 435 - -
Dod01g2842 555 MobiDBLite consensus disorder prediction 42 57 - -
Dod01g2842 555 MobiDBLite consensus disorder prediction 226 256 - -
Dod01g2842 555 MobiDBLite consensus disorder prediction 226 245 - -
Dod01g2842 555 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 555 - -
Dod01g2842 555 MobiDBLite consensus disorder prediction 317 333 - -
Dod01g2842 555 MobiDBLite consensus disorder prediction 292 373 - -
Dod01g2842 555 PANTHER OS04G0572500 PROTEIN 1 555 - -
Dod01g2842 555 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2842 Dod-Chr1 68655185 68658712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2842 2 357 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 39.837 2.58e-50 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2842 - - gmx:100790018 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2842 01 68655185 68658712 Dod01g2842 01 68655185 68658712 ECH
Dod01g2842 01 68655185 68658712 Dod07g0212 07 2692535 2697773 PCT