Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2838 ATGGAAATGGACGATCATCATCATCACCATCATCATAACCATCATCAACAACAACAGTATGGTATCACTGATCTTAGGCAGCTTGTGAATGGACCAACAAGGTTCACTCATCATTTCCCTTCAATACCATCAGCACATCCAACGGCGGAGCTATTCCCCGGCCACCCGAATCTAACGGCCACACACCACCAACACTACGAGATGATGATGTCTGGTCGTGAAGTAGCTGACATAATGCCTCGCTGTCTTCACGAATTTGCCTCTACTGATGCTGCTGCTGCTGCTGCAGCCACCAATACTAGCAGCATCGCTGTGGCTGCTACTCCTCCTACCACCACCACTAGTGCTTCAACTCCTCCGCTTAGTGGCTTAGGGGCTGAGGCTGCAGGATGCGTAGGTGGAGATGCCTCCACCGGAAGATGGCCCAGGCAGGAGACGCTCACTCTTCTTGAGATCAGATCTCGCCTTGACCTTAAATTCAAAGAGGCTAATCAAAAGGGCCCCTTATGGGATGAAGTTTCTAGGATCATGTCTGAAGAGCATGGATACCAAAGGAGTGGTAAAAAGTGCAGGGAGAAGTTTGAGAACCTTTACAAATATTACAAGAAGACAAAGGAAGGTAAGGCTGGAAGACAAGATGGGAAGCACTACAGGTTCTTTCGCCAACTTGAAGCCTTATATGGAGAAAACAGTAACACAGCCTCAGCACCAGAAACCAATTTTGGTAGCAGCAGCCTTCGTTACCAGACAAATAATAGCCATGCCCCTCATTCCCAAACAAACAATAATAGTCAAGAAATTCTGATTCAGTCTCATCACAAGCATTGTGATAGCCTCAGCCTCACTAACTCCACTGACTTTGACACCTCTTCATCAGATGATGACAATGATCACCACAGCACTGAGGGGCTCAAGGACAATGACTCCGTGGAGAAGAGGAGAAAGAGGGCGAGTGGGAGGAGCTGGAAGGTGAAGATCAAAGACTTCATTGACTTGCAGATGAGGAAGCTGGTGGAGAAGCAAGAGGAGTGGCTGGACAAGCTCATGAAGACACTTGAGCAGAAGGAGAAGGAGAGGGTGTTGAGAGAGGAAGAGTGGAGGAGGCAAGAGGCGGCAAGGTTAGAGAGGGAGCACAAGTTTTGGGCTAAAGAGAGGGCGTGGATCGAAGCCAGGGATGCTGCTCTAATGGAGGCTTTGCAGAAGCTAACAGGAAGTGAGATAAAGGCTCAGTCTCCTGAGGGGCTAATAGCTGCCGGGATTCAAAACCACACTGAGAACCAAAATGAAGATGGAAGTGAAATACAAAATAGCACTACAAGAGGTGCTGATAGCTGGCAAGAACCTGAGATTGTAAGGCTTCTTCAGTTGAGAGCTGAGATGGAAACAAGGTTTAGACAAGGTGGTTGTTCAGAAGAGGTTATGTGGGAGGAAATAGCAACCAAAATGGCTTGTTTTGGTTATGAAAGGGGTGCTTTCATGTTGAAAGAGAAATGGGAGAGTATCAGCAGCTATCCAAGGAATGCTAAGGAAGGAAACAAGAAGCGCAAGGAGAACACAAGAAGTTGTTTTTACTTTGATAACAATGACCAGCCTTCTCTATATAACCATGGAAGTGGCTACTGTGATATCAACGATCCAAGGCACGAGACTGGGAGGCTACAAACAAATGATGGTTCCTCACCTTCGAATTCCAATGTTGGAAATGCTGTTCCTGCTGACAGCTGCTTTCCCTTCTTGATGAGTGAAGGAGGAAATTTGTGGGACAATTACAGCTTAAAGGTTAACAAGGCAAACCAAAACCAGTAG 1806 0.4684 MEMDDHHHHHHHNHHQQQQYGITDLRQLVNGPTRFTHHFPSIPSAHPTAELFPGHPNLTATHHQHYEMMMSGREVADIMPRCLHEFASTDAAAAAAATNTSSIAVAATPPTTTTSASTPPLSGLGAEAAGCVGGDASTGRWPRQETLTLLEIRSRLDLKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNTASAPETNFGSSSLRYQTNNSHAPHSQTNNNSQEILIQSHHKHCDSLSLTNSTDFDTSSSDDDNDHHSTEGLKDNDSVEKRRKRASGRSWKVKIKDFIDLQMRKLVEKQEEWLDKLMKTLEQKEKERVLREEEWRRQEAARLEREHKFWAKERAWIEARDAALMEALQKLTGSEIKAQSPEGLIAAGIQNHTENQNEDGSEIQNSTTRGADSWQEPEIVRLLQLRAEMETRFRQGGCSEEVMWEEIATKMACFGYERGAFMLKEKWESISSYPRNAKEGNKKRKENTRSCFYFDNNDQPSLYNHGSGYCDINDPRHETGRLQTNDGSSPSNSNVGNAVPADSCFPFLMSEGGNLWDNYSLKVNKANQNQ* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2838 601 Coils Coil 338 365 - -
Dod01g2838 601 PANTHER - 33 592 - -
Dod01g2838 601 MobiDBLite consensus disorder prediction 1 20 - -
Dod01g2838 601 CDD GT1 140 205 - -
Dod01g2838 601 SMART sant 441 504 IPR001005 -
Dod01g2838 601 SMART sant 137 200 IPR001005 -
Dod01g2838 601 MobiDBLite consensus disorder prediction 230 261 - -
Dod01g2838 601 CDD GT1 445 509 - -
Dod01g2838 601 Pfam Myb/SANT-like DNA-binding domain 140 226 IPR044822 -
Dod01g2838 601 Pfam Myb/SANT-like DNA-binding domain 443 529 IPR044822 -
Dod01g2838 601 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 33 592 - -
Dod01g2838 601 MobiDBLite consensus disorder prediction 286 317 - -
Dod01g2838 601 MobiDBLite consensus disorder prediction 553 567 - -
Dod01g2838 601 MobiDBLite consensus disorder prediction 424 444 - -
Dod01g2838 601 MobiDBLite consensus disorder prediction 291 315 - -
Dod01g2838 601 MobiDBLite consensus disorder prediction 545 567 - -
Dod01g2838 601 Gene3D - 141 203 - -
Dod01g2838 601 Gene3D - 445 506 - -
Dod01g2838 601 ProSiteProfiles Myb-like domain profile. 133 198 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2838 Dod-Chr1 68591032 68594908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2838 16 596 Trihelix Transcription Factor Family AT5G03680 45.543 1.27e-146 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod01g2838 Myb_DNA-bind_4 1.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2838 - - gmx:100813245 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2838 01 68591032 68594908 Dod01g2838 01 68591032 68594908 ECH
Dod01g2838 01 68591032 68594908 Dod07g0208 07 2621089 2624662 PCT