Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod01g2838 | ATGGAAATGGACGATCATCATCATCACCATCATCATAACCATCATCAACAACAACAGTATGGTATCACTGATCTTAGGCAGCTTGTGAATGGACCAACAAGGTTCACTCATCATTTCCCTTCAATACCATCAGCACATCCAACGGCGGAGCTATTCCCCGGCCACCCGAATCTAACGGCCACACACCACCAACACTACGAGATGATGATGTCTGGTCGTGAAGTAGCTGACATAATGCCTCGCTGTCTTCACGAATTTGCCTCTACTGATGCTGCTGCTGCTGCTGCAGCCACCAATACTAGCAGCATCGCTGTGGCTGCTACTCCTCCTACCACCACCACTAGTGCTTCAACTCCTCCGCTTAGTGGCTTAGGGGCTGAGGCTGCAGGATGCGTAGGTGGAGATGCCTCCACCGGAAGATGGCCCAGGCAGGAGACGCTCACTCTTCTTGAGATCAGATCTCGCCTTGACCTTAAATTCAAAGAGGCTAATCAAAAGGGCCCCTTATGGGATGAAGTTTCTAGGATCATGTCTGAAGAGCATGGATACCAAAGGAGTGGTAAAAAGTGCAGGGAGAAGTTTGAGAACCTTTACAAATATTACAAGAAGACAAAGGAAGGTAAGGCTGGAAGACAAGATGGGAAGCACTACAGGTTCTTTCGCCAACTTGAAGCCTTATATGGAGAAAACAGTAACACAGCCTCAGCACCAGAAACCAATTTTGGTAGCAGCAGCCTTCGTTACCAGACAAATAATAGCCATGCCCCTCATTCCCAAACAAACAATAATAGTCAAGAAATTCTGATTCAGTCTCATCACAAGCATTGTGATAGCCTCAGCCTCACTAACTCCACTGACTTTGACACCTCTTCATCAGATGATGACAATGATCACCACAGCACTGAGGGGCTCAAGGACAATGACTCCGTGGAGAAGAGGAGAAAGAGGGCGAGTGGGAGGAGCTGGAAGGTGAAGATCAAAGACTTCATTGACTTGCAGATGAGGAAGCTGGTGGAGAAGCAAGAGGAGTGGCTGGACAAGCTCATGAAGACACTTGAGCAGAAGGAGAAGGAGAGGGTGTTGAGAGAGGAAGAGTGGAGGAGGCAAGAGGCGGCAAGGTTAGAGAGGGAGCACAAGTTTTGGGCTAAAGAGAGGGCGTGGATCGAAGCCAGGGATGCTGCTCTAATGGAGGCTTTGCAGAAGCTAACAGGAAGTGAGATAAAGGCTCAGTCTCCTGAGGGGCTAATAGCTGCCGGGATTCAAAACCACACTGAGAACCAAAATGAAGATGGAAGTGAAATACAAAATAGCACTACAAGAGGTGCTGATAGCTGGCAAGAACCTGAGATTGTAAGGCTTCTTCAGTTGAGAGCTGAGATGGAAACAAGGTTTAGACAAGGTGGTTGTTCAGAAGAGGTTATGTGGGAGGAAATAGCAACCAAAATGGCTTGTTTTGGTTATGAAAGGGGTGCTTTCATGTTGAAAGAGAAATGGGAGAGTATCAGCAGCTATCCAAGGAATGCTAAGGAAGGAAACAAGAAGCGCAAGGAGAACACAAGAAGTTGTTTTTACTTTGATAACAATGACCAGCCTTCTCTATATAACCATGGAAGTGGCTACTGTGATATCAACGATCCAAGGCACGAGACTGGGAGGCTACAAACAAATGATGGTTCCTCACCTTCGAATTCCAATGTTGGAAATGCTGTTCCTGCTGACAGCTGCTTTCCCTTCTTGATGAGTGAAGGAGGAAATTTGTGGGACAATTACAGCTTAAAGGTTAACAAGGCAAACCAAAACCAGTAG | 1806 | 0.4684 | MEMDDHHHHHHHNHHQQQQYGITDLRQLVNGPTRFTHHFPSIPSAHPTAELFPGHPNLTATHHQHYEMMMSGREVADIMPRCLHEFASTDAAAAAAATNTSSIAVAATPPTTTTSASTPPLSGLGAEAAGCVGGDASTGRWPRQETLTLLEIRSRLDLKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNTASAPETNFGSSSLRYQTNNSHAPHSQTNNNSQEILIQSHHKHCDSLSLTNSTDFDTSSSDDDNDHHSTEGLKDNDSVEKRRKRASGRSWKVKIKDFIDLQMRKLVEKQEEWLDKLMKTLEQKEKERVLREEEWRRQEAARLEREHKFWAKERAWIEARDAALMEALQKLTGSEIKAQSPEGLIAAGIQNHTENQNEDGSEIQNSTTRGADSWQEPEIVRLLQLRAEMETRFRQGGCSEEVMWEEIATKMACFGYERGAFMLKEKWESISSYPRNAKEGNKKRKENTRSCFYFDNNDQPSLYNHGSGYCDINDPRHETGRLQTNDGSSPSNSNVGNAVPADSCFPFLMSEGGNLWDNYSLKVNKANQNQ* | 602 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod01g2838 | 601 | Coils | Coil | 338 | 365 | - | - | |
Dod01g2838 | 601 | PANTHER | - | 33 | 592 | - | - | |
Dod01g2838 | 601 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Dod01g2838 | 601 | CDD | GT1 | 140 | 205 | - | - | |
Dod01g2838 | 601 | SMART | sant | 441 | 504 | IPR001005 | - | |
Dod01g2838 | 601 | SMART | sant | 137 | 200 | IPR001005 | - | |
Dod01g2838 | 601 | MobiDBLite | consensus disorder prediction | 230 | 261 | - | - | |
Dod01g2838 | 601 | CDD | GT1 | 445 | 509 | - | - | |
Dod01g2838 | 601 | Pfam | Myb/SANT-like DNA-binding domain | 140 | 226 | IPR044822 | - | |
Dod01g2838 | 601 | Pfam | Myb/SANT-like DNA-binding domain | 443 | 529 | IPR044822 | - | |
Dod01g2838 | 601 | PANTHER | TRIHELIX TRANSCRIPTION FACTOR PTL | 33 | 592 | - | - | |
Dod01g2838 | 601 | MobiDBLite | consensus disorder prediction | 286 | 317 | - | - | |
Dod01g2838 | 601 | MobiDBLite | consensus disorder prediction | 553 | 567 | - | - | |
Dod01g2838 | 601 | MobiDBLite | consensus disorder prediction | 424 | 444 | - | - | |
Dod01g2838 | 601 | MobiDBLite | consensus disorder prediction | 291 | 315 | - | - | |
Dod01g2838 | 601 | MobiDBLite | consensus disorder prediction | 545 | 567 | - | - | |
Dod01g2838 | 601 | Gene3D | - | 141 | 203 | - | - | |
Dod01g2838 | 601 | Gene3D | - | 445 | 506 | - | - | |
Dod01g2838 | 601 | ProSiteProfiles | Myb-like domain profile. | 133 | 198 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod01g2838 | Dod-Chr1 | 68591032 | 68594908 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod01g2838 | 16 | 596 | Trihelix Transcription Factor Family | AT5G03680 | 45.543 | 1.27e-146 | 434 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Trihelix | Dod01g2838 | Myb_DNA-bind_4 | 1.1e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod01g2838 | - | - | gmx:100813245 | 857.825 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod01g2838 | 01 | 68591032 | 68594908 | Dod01g2838 | 01 | 68591032 | 68594908 | ECH | |
Dod01g2838 | 01 | 68591032 | 68594908 | Dod07g0208 | 07 | 2621089 | 2624662 | PCT |