Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2831 ATGGACACGGAGAGCTCGCGTAGATCGTTCGATAGATCGAGAGAACCGGGCGCCAAGAAGCCCCGACTGATCGGCGAGCTCGGCCGCGGTTCGAACCCCTCCGCCCGGCCGTTTCCTCAACCGCCGCCGTCCTCTGCGGTCACGGCGAGGTTCCGAACCAACGGCGACAGAGACTCCGAAAGCGGCGATTCGGGTCGGGTCGGGTACCACCCGCAGGTGCAACTGCCTCACCAAGAGCTTGTGGGTCAGTACAAGACGGCGCTCGCTGAACTCACTTTCAACTCGAAGCCCATAATTACCAATTTGACCATCATCGCCGGAGAGAATCTTTCTGCTGCCAAGGCAATTGCTGGCACCGTTTGTACCAACATTGTAGAGGTTCCAAGTGAACAAAAGCTGCCATCTCTTTATCTCTTAGACAGTATTGTGAAGAATATTGGGCAGGATTATATAAAGTACTTTGCTGCCAGACTACCTGAGGTATTCTGCAAGGCATACCGACAGGTTTATCCTTCTGTCCATTCAAGTATGAGGCATCTTTTTGGAACTTGGAAAGCAGTGTTTCCTCCACAGACCCTTCAGATGATTGAGAAGGAGCTTGGTTTCACTCCTGCAGTCAATGGTTCAGCTTCTGCATCTGCTACACTCAGGAGTGATTCACAGTCACAACGCCCGGGTCATAGCATCCATGTGAATCCAAAGTATTTAGAAAGGCAGCGTCTCCAGCAGTCCGAGAGGACTAAAGGAGTAGTTAATGATATGACTGGAGCTATTTCAAACTCAAATGAGGATCCAGAGAGGCCAAGCAGAGCTTTGGGTGCTTCACGACCATGGCTGGATCCTAGGATTAATATGAAGAGTAATCAGCGCATTCAAAGAGATGCGTTTAATGATTCTGTTCCTGAGAAGAGTGTTGCTGAATCTTATGGAGGCATTGAAAATAGTTCTGATATTTCATGTAAGTTGGGTTTGGGTATGGGAAGAACCGGCAGTAGGGTGCCTGAGTTGGGGCATGACAAAACTTGGTATAAAGCTGGCATTGATGTTGCAGAGACCACCATATCTGGACAAAGAAATGGTTTTAGTTTCAAGCTTGGTATTTCAAATCTTGAAGCACCGAAGTCCACTGAACTTGGATGCACATCATCAACCAACACAAAACGTAACTAA 1170 0.4855 MDTESSRRSFDRSREPGAKKPRLIGELGRGSNPSARPFPQPPPSSAVTARFRTNGDRDSESGDSGRVGYHPQVQLPHQELVGQYKTALAELTFNSKPIITNLTIIAGENLSAAKAIAGTVCTNIVEVPSEQKLPSLYLLDSIVKNIGQDYIKYFAARLPEVFCKAYRQVYPSVHSSMRHLFGTWKAVFPPQTLQMIEKELGFTPAVNGSASASATLRSDSQSQRPGHSIHVNPKYLERQRLQQSERTKGVVNDMTGAISNSNEDPERPSRALGASRPWLDPRINMKSNQRIQRDAFNDSVPEKSVAESYGGIENSSDISCKLGLGMGRTGSRVPELGHDKTWYKAGIDVAETTISGQRNGFSFKLGISNLEAPKSTELGCTSSTNTKRN* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2831 389 MobiDBLite consensus disorder prediction 245 266 - -
Dod01g2831 389 MobiDBLite consensus disorder prediction 211 228 - -
Dod01g2831 389 MobiDBLite consensus disorder prediction 1 70 - -
Dod01g2831 389 Gene3D - 71 201 IPR008942 -
Dod01g2831 389 CDD CID_Pcf11 83 193 - -
Dod01g2831 389 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 4 374 - -
Dod01g2831 389 SMART 558neu5 79 201 IPR006569 -
Dod01g2831 389 Pfam CID domain 85 194 IPR006569 -
Dod01g2831 389 ProSiteProfiles CID domain profile. 76 204 IPR006569 -
Dod01g2831 389 MobiDBLite consensus disorder prediction 211 276 - -
Dod01g2831 389 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 4 374 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Dod01g2831 389 MobiDBLite consensus disorder prediction 1 22 - -
Dod01g2831 389 SUPERFAMILY ENTH/VHS domain 77 205 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2831 Dod-Chr1 68543257 68546427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2831 79 238 C2H2 Transcription Factor Family AT4G04885 59.375 3.50e-58 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2831 K14400 - gmx:100788958 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2831 01 68543257 68546427 Dod01g2831 01 68543257 68546427 ECH