Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2829 ATGGAAATGCCCGCTCGAAGATCCAACTACTCGCTACTAAGCCAAGTCCCCGACGACCACTTCGCCGCTGCCACTCCACCGCACTTTGATTCTTCCTCCAGCGACAGCAAGAACAACAACAACAACAAGGCGAAGCTGGATAGGAGCTTCGATTGGGACTCGGTCGCCGATTACAGGCTGGCGCAGCAAGGGAATCGGATCGGGAACCCGTACTCGTCGTCGATCGGGCTGCAGAGGCAGTCCAGCGGGAGCAGCTTCGGTGAGAGCTCGCTCTCCGGCGATTGCTACGCTCCGACGCTGTCCACCACCGCCGCCGCCGCCGCCAACGAGATCGACGCCTTCGGATATGGCCGCGGCGACGGATTCAAGTTCGGCGGCAGAGGAGAGGTGAGGGCGAAGTTCGCGGAGGTGACATCGGGGAAGAGCTGGGCGCTGCAGACGGAGGAGAGTTACCAGCTTCAGCTGGCGTTGGCGCTGAGGCTCTCGTCCGAGGCCACGTGCGCTGATGATCCGAATTTTCTGGATCCGTTGCCTGATGAATCCGCCTTGAGGTCATCGTCGTCGAATTCCCCAGAGGCTGTGTCGTATAGGTTCTGGGTGAATGGCTGCCTATCATACTTCGACAAAATTCCTGATGGCTTTTACCTAATTCATGGGATGGATCCCTATGTCTGGACTGTGTGCACTGATCTGCAGGAAAATGGCCGAATTCCATCAGTTGATACACTAAAGTCTATGGATCCCTTGACTGATTCTTCACTTGAAGTAGTTTTGGTGGATCGACGTAGTGATCCCAGCTTAAAAGAACTGCAAAACAGAGTACGTAGCATTTCTTGTAGCAGTATAACAACAGCAGACGTTGTAGACCAGCTTGCCAAGCTAGTTTGCAATTGCATGGGGGGTTCAGCTTCTGTTTGGGAAGATGACTTCTATTCCATTTGGAGGGAGAGCATTACTTCTCTGAAAGATTGCATAGGTTCTGTTGTTGTTGCAATTGGCAGTCTATGTGTTGGACTCTGTAGGCATCGTGCTATATTATTCAAAGTACTAGCTGACACCATTGATTTACCATGTCGAATTGCAAAGGGCTGTAAATATTGCTCAAGAGATGATGCCTCCTCTTGTCTTGTCCGATTTGGGCTTGAAAGGGAATATCTGGTTGATCTAGTTGGGAAGCCGGGTTGCTTATGCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTTCAAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCGGATTCTCTGTCTCTTGAGCTTGTCTTTGATAATGGTTCTGCAGAACAGTTTGATGGGAAGTGCAGGGACAGGAATAACCCCAGGCCAATTCCAAATGACGGCAACAGAAGTTCCCTTATTCCTCTGCATCCCCATGCTTACCATCCAAGTGCAAGTGATCAAGGATCCGAATCATTTAAATCATGTAATCTGCCTGAGAACATTGTAGAACTGACGATTGCGGGGAAGGATCTGCTGCCTTTCAAGCATAACCGTATTGGTCATAGAGATACGCAAACCCCATTAGCACTAACAAAATCCAATATGGATGTTATTGAGGGCATGAAGTTTGTTGAAGGAAGTCAATTGATTCCTAACAAACCTACTAGAAAGCTTGGCCTTGATATGGAGGATTTGGACATACCGTGGAGTGATCTTGTTTTAAAAGAGAAAATAGGGTCAGGTTCTTTTGGAACTGTTCATCGTGCTGAGTGGAATGGATCGGAGGTTGCTGTCAAAATTCTAATGGAACAAGATTTTCTTGCTGAGCGCTTCAATGAATTCCTGAGGGAGGTTGCAATAATGAAACGCTTGCGGCATCCAAACATTGTTTTATTCATGGGTGCAGTCACTCAGCCTCCTAACTTATCAATTGTCACAGAGTATTTGTCCAGGGGTAGCTTATATAGGTTGTTGCATAAACCTGGTGCCAGAGAGATGTTGGATGAGAGGCGTAGGCTCAATATGGCTTATGATGTGGCTAAGGGGATGAATTATCTTCATAAACATAATCCTCCCATTGTTCATAGAGATCTCAAGTCTCCAAACCTTCTCGTTGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGACTAAAGGCAAATACATTTCTTTCATCAAAGTCAGCTGCTGGGACTCCTGAATGGATGGCTCCAGAAGTTCTTCGGGATGAACCATCAAATGAGAAGTCAGATATTTACAGCTTTGGTGTAATCTTGTGGGAGCTTGCAACATTGCAACAGCCGTGGAGTAGTTTGAATCCAGCACAGGTTGTGGCAGCCGTTGGCTTTAAGGGGAAAAGACTTGAGATACCACATGAGTTGAATCCCCAATTAGCCTTAATAATTGAGACTTGCTGGGCCAATGAGCCCTGGAAACGCCCTTCTTTTTCAAGTATTATGGAGTCTTTGAGGGGATTGCTCAAACCTCCCACACCGCAACCTAGTCGTTCAAACATGCCATTACTTACCTGA 2556 0.4742 MEMPARRSNYSLLSQVPDDHFAAATPPHFDSSSSDSKNNNNNKAKLDRSFDWDSVADYRLAQQGNRIGNPYSSSIGLQRQSSGSSFGESSLSGDCYAPTLSTTAAAAANEIDAFGYGRGDGFKFGGRGEVRAKFAEVTSGKSWALQTEESYQLQLALALRLSSEATCADDPNFLDPLPDESALRSSSSNSPEAVSYRFWVNGCLSYFDKIPDGFYLIHGMDPYVWTVCTDLQENGRIPSVDTLKSMDPLTDSSLEVVLVDRRSDPSLKELQNRVRSISCSSITTADVVDQLAKLVCNCMGGSASVWEDDFYSIWRESITSLKDCIGSVVVAIGSLCVGLCRHRAILFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGLEREYLVDLVGKPGCLCEPDSLLNGPSSISFSSPLRFSRLKPAEPTIDFRSLAKQYFSDSLSLELVFDNGSAEQFDGKCRDRNNPRPIPNDGNRSSLIPLHPHAYHPSASDQGSESFKSCNLPENIVELTIAGKDLLPFKHNRIGHRDTQTPLALTKSNMDVIEGMKFVEGSQLIPNKPTRKLGLDMEDLDIPWSDLVLKEKIGSGSFGTVHRAEWNGSEVAVKILMEQDFLAERFNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAREMLDERRRLNMAYDVAKGMNYLHKHNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDIYSFGVILWELATLQQPWSSLNPAQVVAAVGFKGKRLEIPHELNPQLALIIETCWANEPWKRPSFSSIMESLRGLLKPPTPQPSRSNMPLLT* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2829 851 Gene3D Transferase(Phosphotransferase) domain 1 656 843 - -
Dod01g2829 851 ProSiteProfiles Protein kinase domain profile. 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2829 851 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 131 845 - -
Dod01g2829 851 SMART serkin_6 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2829 851 MobiDBLite consensus disorder prediction 21 45 - -
Dod01g2829 851 CDD STKc_MAP3K-like 583 831 - -
Dod01g2829 851 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
Dod01g2829 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Dod01g2829 851 Pfam Ethylene-responsive protein kinase Le-CTR1 192 397 - -
Dod01g2829 851 SUPERFAMILY Protein kinase-like (PK-like) 561 831 IPR011009 -
Dod01g2829 851 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 131 845 - -
Dod01g2829 851 PRINTS Tyrosine kinase catalytic domain signature 758 780 IPR001245 GO:0004672|GO:0006468
Dod01g2829 851 PRINTS Tyrosine kinase catalytic domain signature 692 710 IPR001245 GO:0004672|GO:0006468
Dod01g2829 851 PRINTS Tyrosine kinase catalytic domain signature 739 749 IPR001245 GO:0004672|GO:0006468
Dod01g2829 851 PRINTS Tyrosine kinase catalytic domain signature 651 664 IPR001245 GO:0004672|GO:0006468
Dod01g2829 851 PRINTS Tyrosine kinase catalytic domain signature 802 824 IPR001245 GO:0004672|GO:0006468
Dod01g2829 851 Pfam Protein tyrosine and serine/threonine kinase 578 831 IPR001245 GO:0004672|GO:0006468
Dod01g2829 851 Gene3D Phosphorylase Kinase; domain 1 570 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2829 Dod-Chr1 68521393 68531072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2829 1 847 MAP Kinase Kinase Kinase AT5G03730 66.092 0.0 1013
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dod01g2829 PK_Tyr_Ser-Thr 2.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2829 K14510 - gmx:100800648 1238.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2829 01 68521393 68531072 Dod07g0199 07 2552328 2568328 PCT