Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2827 ATGGAGTTTTGGGGTGTTGAGGTAAAGAGTGGGGAATCTCTCAAGGTTAATCCAGGAGACGGCAAGATTGTTCACCTTTCAATGGCATGTCTGGGTGAGGTCAACAAGGATAGAGGGAGTGAACCAGTATCCCTATATGTGAAATTTGGTACCCAGAAGCTTGCAATTGGAATACTTTCTTCTGGGAATTTCCCTCAGTTATCATATGATTTGATATTTGAGAAGGAATTTGAGTTATCCCATAACTGTAAAAATGGGAGTGTCTTCTTTACCGGATATAAAGCTGAATCTCCATTGGAATCTGAAAATGAAGATTCCGATGATTTTGATGAAGATATTCCAGTTATTGCTGCCAATGGAAAACCTGAGTTGGAGGCAAAGAAAGGTGTCAAACTTGATGCCACTGAAGCTAAACAAAAGGAGAAAATAGGGGATCCAAAAAAGAATCAGAAGACCAATGCAAAGGATGACAAGGAGGATTCTTCCGAATCTGACTCTGATGAGGATTCTAGTGAAGATAAGTCCATGGTGAATGGTGAGATAAAAGATGCTGAAGGTGAAGATGATAGTGATGGTAACGACAATGATGATGATAAGGAGACACCGAAGAAGTCTGAATTGAGCAAAAAGAGGGTTCTTGAATCACCCAAGAAAACACCTGTTCCAGACAAGAAGGCGAAACTGGTTACTCCTCAGAAGACTGATGGCAAGACCGGTGGCCATGTTGCAACTCCTTACCCTTCTAAGCAGGCTGTTAAGGCAGCTACAAACAAGAAGCAGCCGGCGAAGCAGCAGACCCCCAAGTCAGGTGGAGACTTTGGCTGCAAGTCTTGCAACAGATCATTTAAGACAGAAGAAGGCCTAAATTGCCATACTAGGGACAAGCACAGTGCTAAGTGA 900 0.4278 MEFWGVEVKSGESLKVNPGDGKIVHLSMACLGEVNKDRGSEPVSLYVKFGTQKLAIGILSSGNFPQLSYDLIFEKEFELSHNCKNGSVFFTGYKAESPLESENEDSDDFDEDIPVIAANGKPELEAKKGVKLDATEAKQKEKIGDPKKNQKTNAKDDKEDSSESDSDEDSSEDKSMVNGEIKDAEGEDDSDGNDNDDDKETPKKSELSKKRVLESPKKTPVPDKKAKLVTPQKTDGKTGGHVATPYPSKQAVKAATNKKQPAKQQTPKSGGDFGCKSCNRSFKTEEGLNCHTRDKHSAK* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2827 299 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 295 - -
Dod01g2827 299 Pfam Nucleoplasmin-like domain 3 93 IPR041232 -
Dod01g2827 299 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 295 - -
Dod01g2827 299 MobiDBLite consensus disorder prediction 196 231 - -
Dod01g2827 299 ProSitePatterns Zinc finger C2H2 type domain signature. 275 296 IPR013087 -
Dod01g2827 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 273 299 IPR013087 -
Dod01g2827 299 Gene3D Nucleoplasmin core domain 1 98 - -
Dod01g2827 299 MobiDBLite consensus disorder prediction 127 299 - -
Dod01g2827 299 MobiDBLite consensus disorder prediction 127 160 - -
Dod01g2827 299 MobiDBLite consensus disorder prediction 250 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2827 Dod-Chr1 68481135 68485579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2827 1 298 C2H2 Transcription Factor Family AT5G03740 43.506 3.35e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2827 - - ccaj:109796568 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2827 01 68481135 68485579 Dod01g2827 01 68481135 68485579 ECH