Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2817 ATGACATTGGCCCTGGCCTTTACGGAGGGTGCACCCCATAATGATACAGACGCCCTCACCCAATTCCGCCTCCAAACCGACTCACACGCCTACCTCCTCCCAAACTGGACGGGCAGCGACTCCTGCGCCGCCGCATGGCGCGGTGTCGAGTGCTCCCCAAACGGCAGAGTAGTATCCCTCTCCCTCCCATCCCTCAACCTCCGTGGCCCCATCGAGTCCCTATCCACACTCACCTACCTCCGCTTCCTCGACCTCCACGACAACCGCCTAAACGGCACCGTTTCCACACTCTCCAACTGCACCGCCCTCGAACTCCTCTACCTCTCCCGCAACGACTTCTCCGGTGAGATACCGCCGGGGATATCGTCCCTGAAACTCCTCATAAGGCTCGACATCTCCGACAACAACCTGCGAGGCCCTGTTCCGGAGAAACTGTCCCAACTAACTCACCTCATCACGCTCCGCCTCCAGAACAACGCTCTCTCTGGCAAAGTCCCTGACCTCTCTTCTTCCCTCGTTAACCTAAGCGAACTCAACATGACCAACAACGAACTCTTCGGACACTTACCTGATCCAATGCTCAACAAGTTCGGCATTGCAAGCTTCGCTGGCAATGGCGCACTTTGCGGTTCTACTCCATTGCCAAAATGTTCCTTCACTGAGAGTACTACTCCTTCTCCTTCTTCTTCTAATAATAATAATAACAATGAAACTGTTCCTTCGAACCCTAGCTCGCTGCCTCGACCGAGCAGTGATATCGCAGCTTCGAAAAGCGAAGCTCGGAGAAGGTTGAGTCCCGGGGTGATTGTGGCGATCGTGGTGGCGGTTTGCGTGGTGTTTCTTGTGGTGGTGTCTTTCGCGGTGGCGCACTGTTGTGCCGGGGGAAGAACCTCGAACTCTATGGTGGGGAGTGAGAGTGGGAAGAGGAAGAGCGAGAGTAGCTACGGGAGCGAGAAGAAGGTGTATGCAAGTGGTGGTGGAGAAAGAGACAGTGACGGAACTGCTGACACGGACAGAAGCAAGCTTGTGTTCTTCGATAGGAGGAGCCAGTTTGAGCTTGAGGATCTGCTTCGCGCTTCGGCGGAGATGCTTGGGAAGGGGAGCTTGGGGACGGTGTACAGGGCGGTGCTTGATGATGGGTGCACCGTGGCTGTGAAGAGGCTCAAGGATGCGAACCCTTGCGAGAGGAGTGAGTTCGAGCAGTACATGGATGTTGTTGGGAAGCTGAAGCACCCCAACATTGTCAGGCTCAGAGCCTATTACTATGCCAAGGAAGAGAAGCTTCTTGTCTATGACTATCTCCCCAATGGAAGCCTCCACACTCTTCTTCACGGGAACCGTGGCCCAGGTAGGATTCCGCTAGACTGGACCACAAGAATAAGCCTGGTGTTAGGTGCAGCCAGAGGCCTAGCTCGGATACATGCAGAGTACAGTGCAGCCAAGATCCCTCACGGCAACATCAAATCTTCCAACGTGCTTCTCGACAAGAACGGCGTTGCTTGCATCTCCGACTTCGGCTTGTCACTGCTCCTAAACCCCGGCCACGCCATCGCAAGGTTAGGTGGCTACCGTGCTCCCGAGCAATCAGAACTCAAGAGGCTGTCCCAACAAGCTGACGTGTACAGCTTCGGTATCTTGGTCTTGGAAGTCCTCACTGGTAGAGCACCGTCACAGCACCCTTCACCAGCAGCACGCCCCCGCGTGGAACTGGAGGAACAAGACCATCACATGGACCTTCCGAAATGGGTTCGTTCGGTTGTTAAGGAAGAAGAGTGGACCCCAGAGGTGTTCGATCAGGAGCTGCTGAGGTACAAGAACATTGAGGATGAGCTTGTGGCAATGATGCATGTGGGGTTGGCTTGTGCTGCTCCAGAGCCTGAGAAGAGGCCAACCATGTTGGAAGTTGTTAAGATGGTTGAGGATATCAGGGTGGAACAGTCTCCTATTGTTGAGGATTTTGATGAGTCGCGCAACTCGCTTTCGCCTTCCATTCCCACCACCGAAGATGGCATGGCCTAG 2019 0.5478 MTLALAFTEGAPHNDTDALTQFRLQTDSHAYLLPNWTGSDSCAAAWRGVECSPNGRVVSLSLPSLNLRGPIESLSTLTYLRFLDLHDNRLNGTVSTLSNCTALELLYLSRNDFSGEIPPGISSLKLLIRLDISDNNLRGPVPEKLSQLTHLITLRLQNNALSGKVPDLSSSLVNLSELNMTNNELFGHLPDPMLNKFGIASFAGNGALCGSTPLPKCSFTESTTPSPSSSNNNNNNETVPSNPSSLPRPSSDIAASKSEARRRLSPGVIVAIVVAVCVVFLVVVSFAVAHCCAGGRTSNSMVGSESGKRKSESSYGSEKKVYASGGGERDSDGTADTDRSKLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCERSEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHTLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVLLDKNGVACISDFGLSLLLNPGHAIARLGGYRAPEQSELKRLSQQADVYSFGILVLEVLTGRAPSQHPSPAARPRVELEEQDHHMDLPKWVRSVVKEEEWTPEVFDQELLRYKNIEDELVAMMHVGLACAAPEPEKRPTMLEVVKMVEDIRVEQSPIVEDFDESRNSLSPSIPTTEDGMA* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2817 672 SUPERFAMILY L domain-like 14 195 - -
Dod01g2817 672 SUPERFAMILY Protein kinase-like (PK-like) 362 639 IPR011009 -
Dod01g2817 672 CDD STKc_IRAK 364 642 - -
Dod01g2817 672 Gene3D Phosphorylase Kinase; domain 1 329 433 - -
Dod01g2817 672 MobiDBLite consensus disorder prediction 219 252 - -
Dod01g2817 672 Gene3D Transferase(Phosphotransferase) domain 1 434 660 - -
Dod01g2817 672 Pfam Protein kinase domain 362 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2817 672 MobiDBLite consensus disorder prediction 297 335 - -
Dod01g2817 672 MobiDBLite consensus disorder prediction 653 672 - -
Dod01g2817 672 PANTHER LRR RECEPTOR-LIKE KINASE 8 663 - -
Dod01g2817 672 Gene3D Ribonuclease Inhibitor 75 224 IPR032675 -
Dod01g2817 672 Gene3D Ribonuclease Inhibitor 10 74 IPR032675 -
Dod01g2817 672 Pfam Leucine rich repeat N-terminal domain 13 52 IPR013210 -
Dod01g2817 672 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 663 - -
Dod01g2817 672 MobiDBLite consensus disorder prediction 219 254 - -
Dod01g2817 672 ProSiteProfiles Protein kinase domain profile. 358 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2817 Dod-Chr1 68338914 68341863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2817 13 668 Receptor kinase-like Gene Family AT2G36570 65.158 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod01g2817 Pkinase 1.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2817 - - gmx:100808402 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2817 01 68338914 68341863 Dod07g0189 07 2428587 2431429 PCT