Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2802 ATGATTGCTGAATCAAACATGAGACCAAGCTCCCACTTTGGCTATGCCTTACTTCTCAACCTCTTCCTTTACCTCTGTCATTACTCTTGTTCACAAAAGACTTGCCCAAACTGTGGCTCTATGCAAGTTCCATACCCTTTGAGCGCAGAACCAAGCTGTGGTGATCCATACTACAAGCTTCGCTGTGATTCTCACTCTCAGAAGCTTTACTTTGACACCCTTAATGGCAGTTCCTATTTAGTACTCAGAATCATGTCTTCAGTTCAGCGCATGGTGGTGCAGCCAGCACCTTGGCTACCTGGTTCATGTGTCACACAAGACATGCCAGTGAGCAATGGTCTTTGGCTGAACCAGTCACTCCCTTTCAACATAACTTCATCAAACACAGTGTTCCTCTTTAACTGTTCCCCTCGCCTTCTGGTCTCTCCTCTCAACTGCTCTTCCTCTAGTATCTGCCATCGTTACTTGGAGAGCTCAGGCCATGTTGACGGAAAACTAGCACTTGAGTGTGCAAGTGGTATTCACCCTTGTTGCACCTTTGTTGCTGGTGGAAACCCTTCAGCTTACAAGATTAGGCTTCACGATTCTGGTTGCCAAGCATTCAGGAGCATCCTTCATTTGGATGAGGACAAGCCTCCCAGCCAGTGGGAGGAAGGCCTTGAAATTCAATGGGCTCCTCCACCTGAACCTGTCTGCAGGACACAAAATGATTGTTCTGGAGACTCCAAGTGCTCCCCTTCTGGTAAAAATGGCCTATTTAGATGTCTTTGCAATGGGGGGCATCGCTGGGACCCTTATGAAGCAGCTTGTGTTAGGCACAAGAGAAAGTCTAAGTGGAAAACCAGCTTGGTGGTCTCAATTGGGGTTGTTATATTTTTCTCTTTTGCTATAGTTCTGGCCATCATCACAAAGTCCTGCAAGATCTATAACCATAGGGAGAAGCAAGCAAAGGAAAGGGAATATGTGTTGAAATCAAGTGCCGGGGAGAAACCTCATAGGATGTTCCAGTTGAAAGAGGTGAAGAAGGCAACAAATGGTTTTTCTCATGACAGGATCCTCGGGGTTGGTGGCTTTGGTGAAGTTTATAGAGGTGAACTCCAAGATGGGACAATGGTGGCTGTCAAGAAAGCTAGAGTTGGTAACCTTAAAAGCACACAACAAGTGCTTAATGAGGTTGCAATACTTTCCCAAGTCAACCACAAGAACCTTGTGAGGCTCTTGGGCTGCTGTGTGGAGTCTGAGCAACCATTGATGATCTATGAGTATATCTCAAATGGGACCCTCTATGACCATCTTCATGGTAAGTACCCAAACTTCTTAGACTGGAAAACAAGGCTAAAGGTTGCTTTCCAAACTGCTGAAGCATTGGCTTACTTGCATTCTGCCGCGCACACTCCCATCTACCACAGGGATGTCAAGTCAACAAACATACTATTGGATGATGAATTCAATGCAAAAGTCTCAGATTTTGGGCTATCAAGGTTGGGTAACCCGGGGATTAGTCATGTGTCAACATGTGCTCAGGGAACATTGGGGTACTTAGACCCTGAATACTACCGAAACTACCAGCTAACAGATAAGAGTGATGTTTATAGTTATGGGGTTGTGATGTTAGAGCTTCTGAGTTCTCAGAAAGCAATAGACTTCTCTCGTGATCCAGAATATGTCAACTTGGCAGTTCACGTGAGCCAACATGCAAGCAATGGTACATTCATGGAAGTGGTGGATCAGAGGCTCCTTCTCTCTGTGGATCCCTCTGGTGATGGAATAATGGTGACAAGCATAAAACTCTTCTCTGAGCTTGCACTTGACTGCCTCAGGGAGAAGAAAGGTGAAAGGCCTAGTATGAAGAATATTGTTCAACGCCTCATGTCCATAATTAACGTTGTAGATCAAGAGAGAAATATAGATAATAACAATGAGGTGTGTGTCTGA 1935 0.4512 MIAESNMRPSSHFGYALLLNLFLYLCHYSCSQKTCPNCGSMQVPYPLSAEPSCGDPYYKLRCDSHSQKLYFDTLNGSSYLVLRIMSSVQRMVVQPAPWLPGSCVTQDMPVSNGLWLNQSLPFNITSSNTVFLFNCSPRLLVSPLNCSSSSICHRYLESSGHVDGKLALECASGIHPCCTFVAGGNPSAYKIRLHDSGCQAFRSILHLDEDKPPSQWEEGLEIQWAPPPEPVCRTQNDCSGDSKCSPSGKNGLFRCLCNGGHRWDPYEAACVRHKRKSKWKTSLVVSIGVVIFFSFAIVLAIITKSCKIYNHREKQAKEREYVLKSSAGEKPHRMFQLKEVKKATNGFSHDRILGVGGFGEVYRGELQDGTMVAVKKARVGNLKSTQQVLNEVAILSQVNHKNLVRLLGCCVESEQPLMIYEYISNGTLYDHLHGKYPNFLDWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVSDFGLSRLGNPGISHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVMLELLSSQKAIDFSRDPEYVNLAVHVSQHASNGTFMEVVDQRLLLSVDPSGDGIMVTSIKLFSELALDCLREKKGERPSMKNIVQRLMSIINVVDQERNIDNNNEVCV* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2802 644 SMART serkin_6 347 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2802 644 Pfam Protein tyrosine and serine/threonine kinase 350 623 IPR001245 GO:0004672|GO:0006468
Dod01g2802 644 CDD STKc_IRAK 353 626 - -
Dod01g2802 644 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Dod01g2802 644 Gene3D Transferase(Phosphotransferase) domain 1 423 643 - -
Dod01g2802 644 Pfam Wall-associated receptor kinase galacturonan-binding 35 93 IPR025287 GO:0030247
Dod01g2802 644 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 636 IPR045274 GO:0007166
Dod01g2802 644 Gene3D Phosphorylase Kinase; domain 1 306 422 - -
Dod01g2802 644 ProSiteProfiles Protein kinase domain profile. 347 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2802 644 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 25 636 - -
Dod01g2802 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Dod01g2802 644 SUPERFAMILY Protein kinase-like (PK-like) 329 623 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2802 Dod-Chr1 68143652 68145586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2802 15 633 Receptor kinase-like Gene Family AT5G02070 45.414 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dod01g2802 PK_Tyr_Ser-Thr 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2802 - - gmx:100804678 1070.84