Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2799 ATGAAGTTCCAAAAGCCCAGCAAAATCCAAGCCGTCACTCTCCCAATGATTCTCAGCCCTCCCTACAAAGACTTGATAGCCCAGGCCCACAACGGTTCCGGCAAGACCACGTGTTTCGTGCTCGGCATGCTGAGCCGGGTCGACCCCAACGTTCAGGCCCCTCAGGCACTCTGCATTTGCCCGACCCGAGAACTGGACACCAGGGGCGCGCTCCCGGTCTCGAAGAGGGCTCCGATCATGGCTCAGGTGGTCCTCGGCACCCCCGGCACCATCAAGAAGTGGATGTCGTTCAAGAAGCTGGGTGCTACCAGGTTGAAGATTCTTGTTTTTGATGAGGCCGATCAAATGCTTGCCGAGGATGGTTTTCAAGATGATTCCTTGAGGATTATGAAAGAAATTGAAAAAGTTAATCCTAGTTGCCAGGTTCTTCTGTTTTCTGCTACGTTTAATGACAGTGTCAGGAATTTTGTTTCAAGGACAGTTAAGAAGGATCATAATCAGCTCTTTGTGAAGAAAGAAGAGCTATCTTTGGAGGCAGTGAAGCAATACAAAGTGAATTGTCCTGATGAACTCTCCAAGATTGAAGTGATCAAAGATTATATATTTGAAATAGGAGAGAATGTGGGGCAAACCATTATATTCGTGCGAACAAGGAACAGTGCAAGCATGTTGCATAAATCACTCAGAGATTTGGGCTATGAGGTCACTTCCATACAAGGCGCTCTTGATCATGAGCAGAGAGACAAGATTGTCAAGGAGTTTAGAGATGGTTTGACTCAACTGATGTTCTTGCTCGAGGCTTTGATCAGCAGCAGGTAA 819 0.4725 MKFQKPSKIQAVTLPMILSPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNVQAPQALCICPTRELDTRGALPVSKRAPIMAQVVLGTPGTIKKWMSFKKLGATRLKILVFDEADQMLAEDGFQDDSLRIMKEIEKVNPSCQVLLFSATFNDSVRNFVSRTVKKDHNQLFVKKEELSLEAVKQYKVNCPDELSKIEVIKDYIFEIGENVGQTIIFVRTRNSASMLHKSLRDLGYEVTSIQGALDHEQRDKIVKEFRDGLTQLMFLLEALISSR* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2799 272 Pfam Helicase conserved C-terminal domain 193 262 IPR001650 -
Dod01g2799 272 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 2 261 - -
Dod01g2799 272 Gene3D - 68 175 IPR027417 -
Dod01g2799 272 SMART ultradead3 2 183 IPR014001 -
Dod01g2799 272 Gene3D - 1 67 IPR027417 -
Dod01g2799 272 Pfam DEAD/DEAH box helicase 8 65 IPR011545 GO:0003676|GO:0005524
Dod01g2799 272 Gene3D - 176 269 IPR027417 -
Dod01g2799 272 Pfam DEAD/DEAH box helicase 81 154 IPR011545 GO:0003676|GO:0005524
Dod01g2799 272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 264 IPR027417 -
Dod01g2799 272 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 16 167 IPR014001 -
Dod01g2799 272 PANTHER DEAD-BOX HELICASE DBP80 2 261 - -
Dod01g2799 272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 162 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2799 Dod-Chr1 68112061 68115252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2799 3 268 Eukaryotic Initiation Factors Gene Family AT3G13920 32.203 4.82e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2799 K18655 - gmx:100784739 420.624