Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2757 ATGTCACATGAAGAAGAAGGTGTTGAGATAAAGACGGTTGAGCAGTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTCGTGTCTGATGCTCCCATTTCAGACCAATATAAACAAGCCACCCCACCACAACATCAACAACAACAAGGTGCTGCTTCTGCTTCTGCTTCTGCTCAAGAACATAATACACACACCAAAATGGACACCTCTGAACCCAACAGCACAGAAGAAGCTCCTCCTTCTGCCGCTACTTCTTCTTCTTCTGGTGTTGGTGGTGCTAATAATGGGAGTGGTAGTGGGGAGAAGAAGCCTGAGAGTGTTCCCTCTGCTGGGTTCGGTGAGCTTTTCAGATTTGCTGATGGGTTGGACTACATTCTCATGGCTGTTGGAACTGTTGGAGCAATCGTGCACGGTTGTTCTCTGCCACTGTTCCTTCGCTTCTTTGCGGATCTGGTGAATTCTTTTGGCTCCAATGCTAACAACGTTGACAAGATGACTCAGGAAGTGGTCAAGTATGCATTTTACTTCCTGGTTGTGGGTGCTGCTATATGGGCATCCTCATGGGCAGAGATATCGTGTTGGATGTGGACTGGGGAGAGGCAATCAACAAAGATGAGGATCAAGTACCTTGAAGCTGCTCTGAAGCAGGACATTCAGTTCTTTGACACCGAGGTTCGAACCTCCGATGTTGTCTTTGCCATCAACACTGATGCTGTGATGGTCCAAGATGCCATCAGCGAGAAGTTGGGTAACTTCATTCACTACATGGCCACTTTTGTTTCTGGTTTTGTTGTGGGTTTCACTGCCGTTTGGCAATTGGCACTTGTCACCCTTGCCGTCGTCCCTATGATAGCAGTGATTGGAGCCATCCACACCACCACACTGGCCAAGCTCTCCGGCAAAAGCCAAGAAGCCCTTTCTCAAGCTGGCAACATTGTGGAACAGACGGTTGTGCAAATTCGAGTAGTGCTGGCCTTTGTTGGGGAGTCTCGAGCATTGCAGGCCTACACATCAGCCTTGAAGATTGCCCAGAAACTTGGCTACAAAACTGGGTTTGCAAAGGGAATGGGATTGGGTGCCACTTACTTTGTTGTTTTCTGTTGTTATGCACTTCTGCTATGGTATGGAGGCTATCTTGTTAGGCACCACTACACCAATGGAGGACTTGCCATTGCCACCATGTTTGCCGTTATGATCGGTGGATTGGGTTTAGGCCAGTCTGCCCCAAGCATGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGCTAAAATTTTCCGTATAATCGATCACAAGCCTGGAATAGACAGAAACAGCGAAGCTGGCTTGGAGCTAGATACTGTAACTGGACTTGTAGAGCTAAAAAATGTGGACTTTTCATACCCATCGAGACCAGAGGTTAGGGTCCTCAATGATTTCTCCTTGAGTGTGCCTGCTGGCAAGACCATAGCATTGGTAGGTAGCAGTGGCTCTGGCAAGAGCACTGTGGTTTCCCTCATTGAAAGATTTTATGATCCAACTTCAGGACAAGTTCTGCTGGATGGGCATGACATTAAAACATTGAAGCTTAGATGGCTGAGGCAGCAGATAGGACTAGTGAGCCAAGAGCCTGCATTATTTGCTACCACAATAAGAGAAAATATACTATTGGGCAGACCTGATGCAGACCTGGTTGAGATCGAGGAAGCCTCCAGGGTAGCTAATGCACATTCCTTCATCATCAAACTTCCAGAAGGCTATGAAACCCAGGTAGGAGAGAGGGGGCTGCAACTCTCAGGAGGACAAAAACAGAGAATAGCCATTGCTAGGGCTATGCTGAAAAACCCAGCAATTCTTCTACTAGATGAGGCAACAAGTGCATTGGACTCTGAGTCAGAGAAGCTGGTGCAAGAAGCCCTTGACAGGTTTATGATTGGGAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACTATACGCAAAGCTGACCTTGTAGCTGTACTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCTTTTCCAAAGGTGAAAATGGAGTCTATGCCAAGCTTATAAGGATGCAGGAGATGGCACATGAAACTGCAATGAATAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCCAGAAACTCTGTAAGCTCACCCATAATTGCTCGGAATTCTTCGTATGGCCGGTCACCATACTCTCGCAGACTGTCTGATTTCTCCACATCTGATTTTAGTCTGTCACTTGATGCATCACATCCAAATTACAGGCATGAAAAGCTCGCCTTCAAAGAGCAAGCTAGTTCCTTCTGGCGACTTGCAAAAATGAACTCTCCTGAGTGGCTTTATGCTTTAATGGGCTCTATAGGCTCTGTTGTTTGTGGATCCCTTAGTGCATTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTCTATTACCATCCAAACCACAGACACATGATCAGAGAAATAGATAAATACTGCTACTTATTGATTGGGCTTTCATCAGCTGCGCTTCTCTTCAACACATTGCAACACTCCTTTTGGGATATTGTTGGCGAAAACCTTACAAAACGAGTAAGGGAGAAAATGTTGATGGCAGTGCTCAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCCAGGATTGCTGCCAGGCTTGCTCTTGATGCCAACAATGTTAGATCAGCCATTGGAGATCGAATTTCAGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGTACTGCAGGGTTTGTGTTGCAGTGGCGCCTTGCCCTTGTCCTCATAGCTGTCTTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTTATGACTGGTTTCTCTGGTGACCTGGAAGCTGCCCATGCCAAGGCCACACAGCTAGCAGGAGAGGCTATAGCCAATGTGAGGACTGTTGCAGCCTTCAATTCGGAAACTAAAATTGTTGGTCTCTTTACTTCCAATCTTGAAGCTCCACTACAGAGGTGCTTTTGGAAGGGACAAATATCTGGTAGTGGATATGGGATAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGACTTTGGTATGCTTCTTGGCTTGTGAAGCATGGCATCTCTGATTTCTCTAAAACAATCCGAGTTTTTATGGTCCTCATGGTCTCTGCTAATGGTGCTGCTGAAACTTTAACACTGGCTCCTGACTTCATCAAGGGAGGCCGAGCCATGAGGTCGGTCTTTGAGCTCCTTGACCGTAGAACTGAAATCGAGCCAGATGATCCAGATGCTACACCTGTTCCTGATCGTCTTCGCGGTGAAGTTGAACTTAAGCATGTAGACTTCTCGTATCCCACTCGCCCAGATATGCCTGTGTTCCGCGACCTTGGCCTTCGTGCCAGGGCTGGTAAAACTCTTGCCCTTGTAGGACCTAGTGGCTGTGGTAAGAGCTCAGTCCTTGCTCTTATACAGCGATTCTATGACCCATCATCTGGTCGGGTCATGATTGATGGAAAGGACATCAGGAAGTACAATCTCAAGTCCCTAAGAAGGCACATTGCTGTGGTACCTCAGGAGCCTTGCCTGTTTGCTACTACTATTTATGAAAACATCGCTTATGGACATGACTCGGCTACTGAAGCTGAGATAACTGAGGCTGCAACTCTTGCAAATGCCCACAAGTTCATATGCTCTCTTCCTGATGGATACAAAACATTTGTTGGGGAGAGAGGAGTTCAGTTATCTGGGGGACAAAAGCAAAGAATAGCAGTTGCTCGTGCTTTTGTGAGGAAAGCCGATATTATGCTTCTTGATGAGGCAACAAGTGCACTTGATACTGAATCCGAGAGGTCTGTTCAGGAAGCTCTAGACCGTGCCTCTTCGGGAAAAACAACTATTATTGTTGCACACAGGCTATCCACTATCAGGAATGCCAATACGATTGCTGTGATTGATGATGGGAAAGTAGCAGAACAAGGCTCCCATTCGCAGTTGTTGAAGAATCACCCTGATGGGATTTATGCACGCATGATTCAATTACAAAGGTTCACACACAGTCAAGTCATTGAGATGGCCTCAGGTTCAGGTTCTTCAACATGA 4089 0.4644 MSHEEEGVEIKTVEQWKWSEMQGLELVSDAPISDQYKQATPPQHQQQQGAASASASAQEHNTHTKMDTSEPNSTEEAPPSAATSSSSGVGGANNGSGSGEKKPESVPSAGFGELFRFADGLDYILMAVGTVGAIVHGCSLPLFLRFFADLVNSFGSNANNVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALKQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAIHTTTLAKLSGKSQEALSQAGNIVEQTVVQIRVVLAFVGESRALQAYTSALKIAQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRIIDHKPGIDRNSEAGLELDTVTGLVELKNVDFSYPSRPEVRVLNDFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADLVEIEEASRVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAKLIRMQEMAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRHEKLAFKEQASSFWRLAKMNSPEWLYALMGSIGSVVCGSLSAFFAYVLSAVLSVYYHPNHRHMIREIDKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLMAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLEAPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDDPDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLGLRARAGKTLALVGPSGCGKSSVLALIQRFYDPSSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSATEAEITEAATLANAHKFICSLPDGYKTFVGERGVQLSGGQKQRIAVARAFVRKADIMLLDEATSALDTESERSVQEALDRASSGKTTIIVAHRLSTIRNANTIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTHSQVIEMASGSGSST* 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2757 1362 SUPERFAMILY ABC transporter transmembrane region 769 1092 IPR036640 GO:0005524|GO:0016021
Dod01g2757 1362 ProSitePatterns ABC transporters family signature. 589 603 IPR017871 GO:0005524
Dod01g2757 1362 ProSitePatterns ABC transporters family signature. 1244 1258 IPR017871 GO:0005524
Dod01g2757 1362 MobiDBLite consensus disorder prediction 71 101 - -
Dod01g2757 1362 CDD ABC_6TM_Pgp_ABCB1_D1_like 126 423 - -
Dod01g2757 1362 Gene3D - 1094 1345 IPR027417 -
Dod01g2757 1362 Gene3D - 440 690 IPR027417 -
Dod01g2757 1362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 443 689 IPR027417 -
Dod01g2757 1362 SMART AAA_5 1132 1324 IPR003593 -
Dod01g2757 1362 SMART AAA_5 477 663 IPR003593 -
Dod01g2757 1362 CDD ABC_MTABC3_MDL1_MDL2 1105 1344 - -
Dod01g2757 1362 Pfam ABC transporter transmembrane region 784 1052 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g2757 1362 Pfam ABC transporter transmembrane region 127 399 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g2757 1362 Gene3D ABC transporter type 1, transmembrane domain 761 1070 IPR036640 GO:0005524|GO:0016021
Dod01g2757 1362 Gene3D ABC transporter type 1, transmembrane domain 113 702 IPR036640 GO:0005524|GO:0016021
Dod01g2757 1362 CDD ABC_MTABC3_MDL1_MDL2 450 689 - -
Dod01g2757 1362 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1105 1341 IPR003439 GO:0005524
Dod01g2757 1362 Pfam ABC transporter 468 617 IPR003439 GO:0005524
Dod01g2757 1362 MobiDBLite consensus disorder prediction 33 62 - -
Dod01g2757 1362 Pfam ABC transporter 1125 1272 IPR003439 GO:0005524
Dod01g2757 1362 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 127 415 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g2757 1362 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 782 1069 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g2757 1362 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 450 686 IPR003439 GO:0005524
Dod01g2757 1362 MobiDBLite consensus disorder prediction 29 105 - -
Dod01g2757 1362 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 126 1347 - -
Dod01g2757 1362 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 126 1347 IPR039421 -
Dod01g2757 1362 Gene3D ABC transporter type 1, transmembrane domain 1071 1349 IPR036640 GO:0005524|GO:0016021
Dod01g2757 1362 CDD ABC_6TM_Pgp_ABCB1_D2_like 771 1087 - -
Dod01g2757 1362 SUPERFAMILY ABC transporter transmembrane region 114 434 IPR036640 GO:0005524|GO:0016021
Dod01g2757 1362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1096 1344 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2757 Dod-Chr1 67337693 67344770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2757 128 706 Calmodulin-binding Proteins AT2G36910 39.071 9.95e-120 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2757 K05658 - gmx:100814667 2333.91