Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2742 ATGGTGACGACTTCGATGAGAGCTTCTGAATCATCCCGTCAGAGGCGTGGTGAAGAGCTCCAGATCCACCCAGCTGGTGCACTACTTCTGCTATGTGGTTTGCTTTGGCCCAAGTTTGTTTCTTATTCGAGGCATAGCTGGCTGGCGCCAAAGGATAAGATAAATGGAATGAGGAACAATAATGCCTCATCATGTGTCTCTCTCGGTTCACTCTTGTCCGCTTTTGTTTTGTTGTTTCTGCTACCATCATCACGGGTTCAATGTGCCGACTCGGGTGATTCTTCCTGGGCCCCCTCTTTCTACACCGAAGAAATCTACAAGGAGCTTGAAGGCCTTACCACTGCTTTAACAAGGGACATTAAGGCTGAATTAGGCTTCTGCATTAAGGATACGTTGAAAGATTGGATGGAAGCCTTTGATTTTAGGGGGAGGTTGGATTTCGTGGATAATTGCGTTAAGCAAAAAGGAGATTTCAGAAATCGAATATGTACCAAGGCTGAAATAAGATTCTACTTCCTCAGTACCTTCCAAGGGGGATCATCAACTGGCAGTTTTGCCAAACCTAACATTAATTGCAATTTGACTTCATGGGTTTCTGGCTGTGAACCTGGTTGGAGTTGTGTTGCAGACAAAACTATTGACCTCAAGAAGGATATCAGCGATATTCCTCACCGAGTTAAGAACTGTGAGCCTTGTTGTGAGGGGTTCTTCTGCCCTGAGGGATTGACTTGCATGATAACTTGCCCACTTGGTTCTTATTGTCCACTCGGGAAACTAAACCAAACAACTGGAGTATGCGATCCGTATAGTTACCAGATACCTGCAGGGGAAAAAAATCATAGTTGTGGTGGTGCTCATATTTGGGCCAGTGTTGTGAACAATGGTGATATCTTTTGTTCTCCAGGATCATATTGCCCAACTACAACACGCAAAGTTTCTTGTGATAAAGGGATGCTACTTACTTTGTATTGCTCATTTTTTGCAGCATGCTCCAGATTGAGTACCTGCAATCCAAACACCTCGACCCAAAATATGCATGTTTATGGCGCTTTGCTTATTGTGTGCTTGAGCACTCTCCTAATCTTCATTTATAACTGTTCTGATCGAGTTCTAGTCACTCGAGAGAGAAGGAAAGCAAAATCCAGGGAAGCTGCAGCAAGGCATGTAAGAGAAACTGCACAAGCTCGTGAGAGGTGGAAACTAGCTAAAGACATTGCTAAGAAGCGCACAATGGATCTGTCGCGCACATTCTCACGCAGAAAGTCACAAAAGCAAACAGATCTTCCACAAGTTTCAAGCACATCTGAGAAGTCATCTGCAGCTTCAAAAGGAAAAAAGAAGGAACCTACCAATCTCACTAAGATGATGAATTCCCTCGAGAATGACCCCGATAGCCATGAAGGATTTGACATGCAGATTGGAGACAAAAACATTAAAAAGAATATGGCAAAGGGGAAACAGTTGCATACACATAGCCAGATTCTGAGGTATGCTTATGGCCAGCTTGAGAAGGAGAAAGCTCAGCAAGAGAAGAACAAGAACTTGACATTCTCAGGAGTGATCTCAATGGCTACCACTCAAGGGGACCAGGTGAGGAGAAGGCCTCCGATTGAGATAGCTTTCAAGGACATTACACTCACTTTGATAGGGAAGAACAAGCATCTGCTGAGATGTGTGACTGGTAAGCTCATGCCTGGTCGAGTGTCAGCTGTCATGGGACCCTCAGGAGCTGGGAAAACCACATTCCTTTCAGCTTTGGTAGGGAAAGCAAAAGGGTGCAATATAACGGGAGAAATTCTAATTAATGGAACACCTGAATCCATTAACTCCTATAAGAAAATTACTGGCTTTGTGCCGCAAGATGATATTGTGCACGGGAACTTGACAGTGGAGGAAAATCTCCGTTTCAGTGCAAGATGCAGACTTTCTGCGGACATGCCAAAAGCAGAGAAGGTTCTGATTGTTGAAAGAGTGATTGAGTCCTTGGGGCTCCAGCTGGTGAGAGATTCCCTAGTTGGGACTGTAGAGAAGAGAGGCATATCTGGAGGGCAAAGGAAGCGTGTGAATGTTGGGCTGGAGATGGTGATGGAGCCTTCCTTATTGATCTTAGATGAGCCTACAACTGGCCTGGACAGTGCATCGTCCAGTTTACTACTTAAAGCCCTTCGACGTGAAGCTCTTGAAGGGGTAAACATTTGTATGGTGCTTCACCAACCAAGCTATACTTTGTTCAGAACGTTTGATGATATAATATTTCTAGCCAAAGGTGGCCTTACTGCATATCATGGTCCCGTGAAAAAGGTAGAAGAATATTTTGCTGGCATTGGAATCCCTGTACCAGACCGTGTGAACCCTCCAGACCATTTCATTGACATTCTGGAAGGATTGGTGAAACCAAGTTCTGGTGTAACCATTGAACAACTCCCTGTGAGATGGATGCTTCATAATGGATACTCAGTACCACCAGATATGCTTCACTTTGTTGATGAAATTGCTGCATCTTCAGCTGGCTCAAATGTGGTTCCTGCAAGTCAGTCACTAAAGGTTGCTGAGGAAACTAATGAGCAATCCTTTTTCAAGGAGTTTTGGGAGGATCTAAAGAATAATTCTCGGAATCAAAAAGATCACTTAGACGCAATTTTCTTGAGGACCAAGGACTTATCTGACCGAACAACTCCTAGTATAGCCCGGCAGTATAGATACTTTGTTGGCCGGGTTGGCAAGCAACGGTTGCGAGAAGCTAGGTTACAAGCAGTAGATTATCTTCTTTTACTAGTTGCCGGTGCTATATTGGGAACACTTACTAAAGTGAATGATGAAACATTTGGGGCCCTTGGCTATACATTTACTATCATTGCTCTCTACTCTGCAAGATTGGAGCTCTCAGATCATTTTCTCAGGATAAGTTACAATACTGGAGGGAGAGTTCAGCCGGTATCAGCAGGCCTGGCTCATTTTCTGGCCAAAGATACAATTGATCATTTCAACACAATCATCAAACCCGTGGTCTACCTGTCCATGTTCTATTTTTTCAGCAACCCAAGGTCAAGCTTTTTAAGTAACTATGCAGTGCTGATTTGTCTAGTGTACTGTGTGACTGGCATGGCTTATACATTAGCCATTTACTTCGCTCCTAGTCCTGCACAGCTGTGGTCAGTACTTCTTCCTGTGGTTATGACTCTCATTGCAAACCAGAAGGAGGCTAGTACACTTGTGAATATCCTAATGAAATTTTGCTACCCAAAATGGGCTCTGGAGGCTTTCGTCATTGCAAACGCCTGA 3282 0.4412 MVTTSMRASESSRQRRGEELQIHPAGALLLLCGLLWPKFVSYSRHSWLAPKDKINGMRNNNASSCVSLGSLLSAFVLLFLLPSSRVQCADSGDSSWAPSFYTEEIYKELEGLTTALTRDIKAELGFCIKDTLKDWMEAFDFRGRLDFVDNCVKQKGDFRNRICTKAEIRFYFLSTFQGGSSTGSFAKPNINCNLTSWVSGCEPGWSCVADKTIDLKKDISDIPHRVKNCEPCCEGFFCPEGLTCMITCPLGSYCPLGKLNQTTGVCDPYSYQIPAGEKNHSCGGAHIWASVVNNGDIFCSPGSYCPTTTRKVSCDKGMLLTLYCSFFAACSRLSTCNPNTSTQNMHVYGALLIVCLSTLLIFIYNCSDRVLVTRERRKAKSREAAARHVRETAQARERWKLAKDIAKKRTMDLSRTFSRRKSQKQTDLPQVSSTSEKSSAASKGKKKEPTNLTKMMNSLENDPDSHEGFDMQIGDKNIKKNMAKGKQLHTHSQILRYAYGQLEKEKAQQEKNKNLTFSGVISMATTQGDQVRRRPPIEIAFKDITLTLIGKNKHLLRCVTGKLMPGRVSAVMGPSGAGKTTFLSALVGKAKGCNITGEILINGTPESINSYKKITGFVPQDDIVHGNLTVEENLRFSARCRLSADMPKAEKVLIVERVIESLGLQLVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRTFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGIPVPDRVNPPDHFIDILEGLVKPSSGVTIEQLPVRWMLHNGYSVPPDMLHFVDEIAASSAGSNVVPASQSLKVAEETNEQSFFKEFWEDLKNNSRNQKDHLDAIFLRTKDLSDRTTPSIARQYRYFVGRVGKQRLREARLQAVDYLLLLVAGAILGTLTKVNDETFGALGYTFTIIALYSARLELSDHFLRISYNTGGRVQPVSAGLAHFLAKDTIDHFNTIIKPVVYLSMFYFFSNPRSSFLSNYAVLICLVYCVTGMAYTLAIYFAPSPAQLWSVLLPVVMTLIANQKEASTLVNILMKFCYPKWALEAFVIANA* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2742 1093 CDD ABCG_EPDR 536 763 - -
Dod01g2742 1093 Pfam ABC-2 type transporter 737 1093 IPR043926 GO:0140359
Dod01g2742 1093 ProSitePatterns ABC transporters family signature. 680 694 IPR017871 GO:0005524
Dod01g2742 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 539 764 IPR027417 -
Dod01g2742 1093 MobiDBLite consensus disorder prediction 423 439 - -
Dod01g2742 1093 Gene3D - 537 773 IPR027417 -
Dod01g2742 1093 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 94 1092 - -
Dod01g2742 1093 SMART AAA_5 565 757 IPR003593 -
Dod01g2742 1093 Pfam ABC transporter 559 707 IPR003439 GO:0005524
Dod01g2742 1093 MobiDBLite consensus disorder prediction 412 469 - -
Dod01g2742 1093 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 539 780 IPR003439 GO:0005524
Dod01g2742 1093 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 94 1092 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2742 Dod-Chr1 67127888 67141276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2742 566 760 Calmodulin-binding Proteins AT2G36910 26.728 7.24e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2742 - - gmx:100812387 1480.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2742 01 67127888 67141276 Dod01g2742 01 67127888 67141276 ECH