Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2740 ATGGGGAGCAAAGTCACTATACCTTGTGCTGCAGCATGTGAGAACTGTTGTCAATGGGCTCTGTGGTCTTGCATGCATGAAAAGTGTTCCATTCCAAGTGATGTCCCAAAGGGTCACTTGGTTGTGTACGTAGGAGAGAACCACAAGAGATATGTGATCAAGATTACACTGCTCAACCATCCACTCTTCAAGGCCTTGCTTGATCAAGCTCAGGAAGAATATGACTTCATTGCAGATTCAAAACTATGTATTCCTTGCGATGAGCACCTTTTCCTCAGTGTCCTTCACTGTGCAAGCTCACCACAGAAAGAGAGGGCGTCTGTGCGTATCTGA 333 0.4595 MGSKVTIPCAAACENCCQWALWSCMHEKCSIPSDVPKGHLVVYVGENHKRYVIKITLLNHPLFKALLDQAQEEYDFIADSKLCIPCDEHLFLSVLHCASSPQKERASVRI* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2740 110 Pfam Auxin responsive protein 29 96 IPR003676 GO:0009733
Dod01g2740 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 108 IPR003676 GO:0009733
Dod01g2740 110 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 5 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2740 Dod-Chr1 67116522 67116854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2740 18 107 Calmodulin-binding Proteins AT4G34750 43.158 1.70e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2740 K14488 - gmx:100812927 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2740 01 67116522 67116854 Dod01g2740 01 67116522 67116854 ECH