Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2737 ATGAATGCTGATACTTCTTTCACAGAAGATGGAGGGGATTCCAATTCAAGGTGTGGCAAGGAATTGACTAAAGAAAATAAAGATAATGCACAAATGGATCCTCATATGAAGGATAAAAAAAATGCTGGAGAACTTGTATGCTACAAGTGCTTGCATGGTGGAAAACTGCTGTACTGCTGCGGAAAAGGATGTCAAAGGAGGTACCATCCCTATTGTTTGAATCCTCCTCTCAATTATATACCTATGGGGTTTTGGCATTGTGTGTGGTGTGTTAAGAAAAAGCTAGAGCTTGGTGTGCATTCTATTTCTGAAGGGGTGGAATCCATTCTGGATTCTAGAGAAGTGGTTTCAGAAAATAAAGTGATGGAAAGGGAGTACTTCGTCAAGTATAAGGGCCTTGCTCATGCTCACAACCACTGGATTCTGGAAACACGGATGCTTCTCGATGCACCAAAGCTTTTGGCAAAGTTTAAGAGGAAACACCAGGTTATCCGGTGGAAAAGAGAGTGGAGTATACCGCACCGCTTGCTGCTAAAAAGGGCAATTGTATTACCAAAGCAAAGTGATAAACATTTCCATAGGCATGATAACAAGTCAATTGGCCATTATGAGTGGCTTGTAAAGTGGACTGGTCTTGGTTATGATCATGTTACGTGGGAGTTAGATGATGCTCCATTTATGACGTCATCTGAAGGGATGAAACTCATAAAAGATTACGAAAGTCGTCGAAAGAGGACAGATAGACTTTCAAATCCTTTTGAAGCTAGTGAGGAGAGAAAAACTCCCTTTGCTGAATTATCTGGACTGCCATCTGCTGATTCACCAGGATTTTATAACCAGCATTTGAGTTATGTGAACAAACTTCGCATGTTTTGGCACAAAGGTCAGAGTGCTCTTATTGTAGATGATAAGATTGACCAGGAGCGGGTTATGAAGGTGATTTTGTTCATATCAACTTTGCATTATAAAGTGGCAAGGCCTTTTCTAATTATCTCAACTTCCACTGCCCTATCTGTGTGGGAAATGGAGTTCTTACATTTGGTACCATCCGCCAATCTTGTTGTTTACAAAGGAAACAAAGATCTACGGAGTAGCATCAGATCATTAGAGTTTTATAGTGATGATGGCAGCATCTTATTTCAAATATTATTAGCGTCATCTGATGTTATCATTGAGGACTTACTTGCACTGCAACACATTCCTTGGGAAGCAATAATAATTGATGAATGCCAGCGATATCGTATCTTAGAACACCTAGACAATTTCAAGATTCTGGCAGCTGATATGAGGCTCCTGCTTGTTAGTGGACAAATCAAGGAAGATCGAGCTGATTACATCAAACTGCTTTCCTTCCTAAAGTCAGGCCAACAAGTGTTGAATGTTGCTCAAACAGAGGCTTGCTTATCTGACAGCATTTCTGATCTGAAAAGTCAATTGGATCAATATGTTGCATTCAAATGCAACTCAGGGTCAACTAGGTTTGCAGAGTATTGGGTTCCTGCCCAGCTTTCCAGTTTGCAACTTGAGCAGTATTGTTCAATGCTGCTATCCAACTCAATGTTGCTGTGCTCAGGCCAGAAGTCTAATGCCCTCCATGAGCTTATTAGCTCAACAAGGAAGTGCTGCAACCACCCTTATCTCCTGGACCAGTCACTGCACAATTCTCTCAACAGAGGTCTTCCTGTCAAAGAGCATTTAAATGTTGGGATAAACGCAAGTGGCAAACTGCATCTTCTTGAAAAGATCCTTTTGGACGCTAGAAGTCGAGGGTTAAGAGTGGTAATATTATTTCAGTCATCTGGTAGTTTGGTATCGATTGGAAATATTTTGGATGATGTTCTCTGTCAGAGCTTTGGCAAAGATTGTTATGTACGATATGCTAGAGGGTATATCCCCTCAAAGAAGCAAGCTGCTCTAGATGCGTTTAATGACAAAGAAAGTGGAAAATTTGTCTTCTTGATAGAAAGCCGTGCTTGTCGCCCTAGTGTTAAGCTTTCCTCGGTGGATACTGTTATATTATTTGACAGTGATTGGGACCCACAAAATGATGTAAGAGCCTTACAAAAGATGTCTATCAGCTTGCAGCATGAACAGTTAACAGTACTCAGATTGTACTCATACTTCACTGTAGAAGAAAAGGTTTTAATGCTTGCAAAAGAGGGTACAGCTCTTGATAGCAATATCGAATTGATTCACCAGAGTACCTGCCACAACGTGCTCAGATGGGGTGCCTCCCAACTATTCAATAAGCTTGATGACTTACATAGCAGTGGTACCACAGTCTCTGCACCAGACATTTCTGATCAGTCACTTCTAAGTGATGTAATGTCAGAATTATCAACCCTATTGGTTTGTGGCAGAGGTGACATTGATCATCATGGATTGTCCTTCATAGCAAAAGCTCAGCAGAAAGGAGGGGAATATGCAAGGGACGTTTTATTGCTCGGAGAAAGAGTAGTGAATAAACTGAACAATGGTTTGAATGCTTTTTCCTGGAGTAATCTCCTCAAAGGAAGGTATCCTATATGGAAATTTTTGTCTGTTTCATCTCAAAGGATCAGGAAGGCAGTCAACCATTTTGATTGCACACCTAAAGAATCTGAATGTGAAAATGATACCATTATAAGAAAGAAGAGGAAAGTTTCCGAGGATAATGTTGATCCCAAGGGGAGGAAAGTGTCCAAGGATAATGTTGGTGCCAAGAAGTGGAATGTGTCCGAGGATACTGCTGATGCACAGAGGAGGGAAGAGTCCAAGGATATTTTTTATTCAAAATATGTGAAAAAAAGTTTGAAGAACAAGAAGAAGCTAAGTACTGTCTATAATGCAAGTAAAATGATCGGTAATATGGATGACTTGTCTAAGGTAGTTGTGTCCACAGTAGCTGAAATAAATGTTAAATCTTCAGAACAAAAGAAACTGACTGACATGCCAAGGAGCACCGAGTCATTGCCAAAGCCAGATTTAGCAGGTCTTTGTGATGTTCTGCAACTTCCGAAAAATGTCGAGGCTCTTGGCATGAGGATTCTTGAGCACATATTTGAATGTTACAACGTTAATTGCCAAGAAGTTTCTACCATGCAGGCATTTGAAATATCTGTGTGTTGGCTTGCTGCTTCTTTGTTGAAACACAAGATTGGTAGGAGAAGTTCACTTGCTCTTGCCAAATTGCACTTAAACTTTGATTGCAAAGAAGAGGAAGTGACCTATGTTTACTATGCACTGCGGGAATTTAAGAAGGATTTTTCAAGTTGTTTACAAAATGGATTTCATTTTGAGAAACATACGTCAAACTGCAAGACACCCGGGTTGAAAGTTTTGGTGGAGGAGAGTCCCCATGTTTCAGATCTTGTGGAATCAGACACAAATGGACATGATCTTCACAGAAAATCTCCCAGAACAGTGCTATCTACTCATGACCAAACTTGTACAGAAGATTTTCATATCAGACTTATGGCCAATGAAAGTTGTCCATCTCAAAAGATGTGTGGTAGTTTGCCTGTGGAAGCAGATGATGTCCCCATGGATTCTGATGCAGAAGATGACAGAAGGAATGCTATGACTTCAACACCAGCTGGAGTTTCATTGCCTGAGCACCAGAATGAAGTCCCTAATTCAAGTAAATATCCTCATAATGTCAACCCAACAGGTTCGTTGCGAAGACAGATTGATGGTGAAGTTTCTGAAGACTCTCAAATAAATGTGAATGAAGTTGTTGCTGGTGAAAATTCTAAGAACATGTCAACTCATCCTGTACTACTCGATAGTGTTGACACAAACACTGTAACTTGCAATACTGATACTGTTCCTGAGGTCAGCCAGTGTGTGGTGAGTCCTGTACGTGGTGAATCAACTACTTCGGGGATTGCTGAGACTACCTTACCATTCATGCAACCATCAAATGCAAATTTGCAGTCGTTGCCTCAGCAGGATATGCCCCCTATTCCATCTTTTCCAGAGAGCAGTTCAGTGAGCGAAGCCTTGCCTATAGATGAATATTTTTGTCACATTAGCAACCTTCACAATGCTGAAGTAATATTGCAGGCATCAAATGACCCAGTTGAACCAGTTAACCCTTACTTTGTTTCACCTGTAAATAGAACACATGTTCCTCACATTACTAGTCCTGGATTTACGAACAGTGGTCCTTCTCAAGCTCACTCTGTCTTGTCTGAAATGCCCCATGTTGCATTCCCAGACCCACTGCAAATCGAAAAGAAGAGAATAGAAAAGTTGACAGACGAAGCCTCCAAGATACGTGAGCTAAAATTATTGCAGCTCCAGTCTGACTATGAAAAGGAGGTAGAAAAGTTGGGTGAAAAGTACAGAATGTTGCTTCAGAATGCTGATACTGCAGTAGCACAACAAAAGCAGGAACTTGATACATATCGTGAAACAGTTCGTAAGAATATGTTATTGGCTGAGGTTTGGATCCAAAATCATGATAATTACAAAAGCGATGCAGCTCAAAGCACAGAACAAGTGGCAATACCTAGCTCCTCAAGTGCTCATGTATCAAGGAACCGTACCCCTCTTATGCCTGCACAGAGACTTGAACAAGAACAATATGTGACATGTCCACCCATGATTCACCCAACCTTGTACACTTCAATGGAGATGGCTAATACTTCAACAGGCTCCCCAGAAATCAGTCCAGCTAGAGCATACATGAATCCAATGATTCAGTCCTACAGAAATCTTCATAGGATCCATACCCCTCTTCCCCTTGTGCCTGCTCAAAGACATGAACAATATATGGCAGGTCCACCCATGATTCACCCACCCCTGTACCCTCCAATGGAGATGGTTAACACAACATGCATCCCAGAAATTAGCCCTGTTAGACCAAGCATGAATCCCATGATTCAATCCTACAGAAATCTTCATCATGGCTGTGACTTACTGACCCCAAACCCACCTCTTGGAGCCTCTACAGCCTTCTCTCCTTATTCAATGCCCCTCATACCAGGCGGACAGCAATTGCCATGA 4989 0.4131 MNADTSFTEDGGDSNSRCGKELTKENKDNAQMDPHMKDKKNAGELVCYKCLHGGKLLYCCGKGCQRRYHPYCLNPPLNYIPMGFWHCVWCVKKKLELGVHSISEGVESILDSREVVSENKVMEREYFVKYKGLAHAHNHWILETRMLLDAPKLLAKFKRKHQVIRWKREWSIPHRLLLKRAIVLPKQSDKHFHRHDNKSIGHYEWLVKWTGLGYDHVTWELDDAPFMTSSEGMKLIKDYESRRKRTDRLSNPFEASEERKTPFAELSGLPSADSPGFYNQHLSYVNKLRMFWHKGQSALIVDDKIDQERVMKVILFISTLHYKVARPFLIISTSTALSVWEMEFLHLVPSANLVVYKGNKDLRSSIRSLEFYSDDGSILFQILLASSDVIIEDLLALQHIPWEAIIIDECQRYRILEHLDNFKILAADMRLLLVSGQIKEDRADYIKLLSFLKSGQQVLNVAQTEACLSDSISDLKSQLDQYVAFKCNSGSTRFAEYWVPAQLSSLQLEQYCSMLLSNSMLLCSGQKSNALHELISSTRKCCNHPYLLDQSLHNSLNRGLPVKEHLNVGINASGKLHLLEKILLDARSRGLRVVILFQSSGSLVSIGNILDDVLCQSFGKDCYVRYARGYIPSKKQAALDAFNDKESGKFVFLIESRACRPSVKLSSVDTVILFDSDWDPQNDVRALQKMSISLQHEQLTVLRLYSYFTVEEKVLMLAKEGTALDSNIELIHQSTCHNVLRWGASQLFNKLDDLHSSGTTVSAPDISDQSLLSDVMSELSTLLVCGRGDIDHHGLSFIAKAQQKGGEYARDVLLLGERVVNKLNNGLNAFSWSNLLKGRYPIWKFLSVSSQRIRKAVNHFDCTPKESECENDTIIRKKRKVSEDNVDPKGRKVSKDNVGAKKWNVSEDTADAQRREESKDIFYSKYVKKSLKNKKKLSTVYNASKMIGNMDDLSKVVVSTVAEINVKSSEQKKLTDMPRSTESLPKPDLAGLCDVLQLPKNVEALGMRILEHIFECYNVNCQEVSTMQAFEISVCWLAASLLKHKIGRRSSLALAKLHLNFDCKEEEVTYVYYALREFKKDFSSCLQNGFHFEKHTSNCKTPGLKVLVEESPHVSDLVESDTNGHDLHRKSPRTVLSTHDQTCTEDFHIRLMANESCPSQKMCGSLPVEADDVPMDSDAEDDRRNAMTSTPAGVSLPEHQNEVPNSSKYPHNVNPTGSLRRQIDGEVSEDSQINVNEVVAGENSKNMSTHPVLLDSVDTNTVTCNTDTVPEVSQCVVSPVRGESTTSGIAETTLPFMQPSNANLQSLPQQDMPPIPSFPESSSVSEALPIDEYFCHISNLHNAEVILQASNDPVEPVNPYFVSPVNRTHVPHITSPGFTNSGPSQAHSVLSEMPHVAFPDPLQIEKKRIEKLTDEASKIRELKLLQLQSDYEKEVEKLGEKYRMLLQNADTAVAQQKQELDTYRETVRKNMLLAEVWIQNHDNYKSDAAQSTEQVAIPSSSSAHVSRNRTPLMPAQRLEQEQYVTCPPMIHPTLYTSMEMANTSTGSPEISPARAYMNPMIQSYRNLHRIHTPLPLVPAQRHEQYMAGPPMIHPPLYPPMEMVNTTCIPEISPVRPSMNPMIQSYRNLHHGCDLLTPNPPLGASTAFSPYSMPLIPGGQQLP* 1663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2737 1662 SUPERFAMILY Chromo domain-like 65 161 IPR016197 -
Dod01g2737 1662 MobiDBLite consensus disorder prediction 14 36 - -
Dod01g2737 1662 Pfam SNF2-related domain 311 546 IPR000330 GO:0005524|GO:0140658
Dod01g2737 1662 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 15 1245 - -
Dod01g2737 1662 Gene3D - 103 164 - -
Dod01g2737 1662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 496 727 IPR027417 -
Dod01g2737 1662 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 15 1245 - -
Dod01g2737 1662 MobiDBLite consensus disorder prediction 1 36 - -
Dod01g2737 1662 Coils Coil 1428 1466 - -
Dod01g2737 1662 ProSiteProfiles Chromo and chromo shadow domain profile. 104 169 IPR000953 -
Dod01g2737 1662 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 1176 1572 - -
Dod01g2737 1662 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 100 IPR013083 -
Dod01g2737 1662 Pfam Chromo (CHRromatin Organisation MOdifier) domain 106 160 IPR023780 -
Dod01g2737 1662 Gene3D - 1398 1479 - -
Dod01g2737 1662 ProSitePatterns Zinc finger PHD-type signature. 47 90 IPR019786 -
Dod01g2737 1662 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 1176 1572 - -
Dod01g2737 1662 Gene3D - 165 242 - -
Dod01g2737 1662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 315 455 IPR027417 -
Dod01g2737 1662 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 578 739 IPR001650 -
Dod01g2737 1662 SMART PHD_3 46 91 IPR001965 -
Dod01g2737 1662 Gene3D - 493 725 IPR027417 -
Dod01g2737 1662 MobiDBLite consensus disorder prediction 1188 1219 - -
Dod01g2737 1662 ProSiteProfiles Chromo and chromo shadow domain profile. 176 251 IPR000953 -
Dod01g2737 1662 Gene3D - 281 492 IPR038718 -
Dod01g2737 1662 MobiDBLite consensus disorder prediction 1170 1219 - -
Dod01g2737 1662 SUPERFAMILY Chromo domain-like 193 243 IPR016197 -
Dod01g2737 1662 SMART chromo_7 169 244 IPR000953 -
Dod01g2737 1662 SMART chromo_7 103 162 IPR000953 -
Dod01g2737 1662 ProSiteProfiles Zinc finger PHD-type profile. 44 93 IPR019787 -
Dod01g2737 1662 Coils Coil 1402 1422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2737 Dod-Chr1 67059419 67085320 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Dod01g2737 SNF2_N 1.5e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2737 - K11643 gmx:100813574 1547.33