Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2736 ATGGAACCAATCACCATGACCCACCAAGATGTCTCATCATTCTGTTTGCCTAGCAAAACCGCGACTACTACTACAAATGGTGTTGTTGGTAGTGATCCATTGAACTGGGGAGTGGCGGCGGAGTCACTGAAGGGGAGCCACCTGGATGAGGTGAAGCGCATGGTGGCGGAGTACCGGAAGCCGGTGGTCAAGCTCGGCGGGGAGACGCTGACGATATCTCAGGTGGCGGCGATCGCGGCACAGGAGCACCAAGGCGGGGAGGTGAGGGTTGAGCTGTCGGAGTCGGCGAGGGCGGGCGTTAAGGCGAGCAGTGACTGGGTGATGGACAGCATGAACAACGGCACTGACAGTTACGGTGTCACCACCGGCTTCGGTGCCACCTCACATCGCCGTACCAAGGAGGGTGGTGCTCTCCAGAAAGAGCTCATCAGGTTTTTGAATGCTGGAATATTTGGCAATGGTACAGAATCATGCCACACATTGCCACACTCAGCTACAAGAGCAGCCATGCTTGTGAGAATCAACACTCTTCTCCAAGGCTACTCAGGCATTAGATTTGAGATCTTGGAGGCCATAACTAAGCTCCTCAACAACAACATCACCCCATGTTTACCCCTCCGGGGCACAATCACAGCCTCTGGGGACCTTGTCCCACTCTCCTACATTGCCGGTTTGCTAACTGGCAGGCCTAACTCCAGAGCTGTTGGACCCTCCGGAGAGACACTCAATGCAAAACAGGCCTTCCAATTGGCCGGCATCAACTCTGACTTCTTTGACTTGCAGCCCAAGGAAGGCCTTGCCCTTGTTAATGGCACCGCTGTCGGTTCCGGCTTGGCCTCTATAGTCCTCTTTGAGGCCAACATACTTGCTGTCTTGTCCGAAATTCTTTCGGCTATCTTTGCTGAGGTGATGCAGGGGAAGCCTGAATTCACTGATCATTTGACTCATAAGCTGAAGCACCACCCTGGCCAAATTGAGGCTGCTGCTATCATGGAGCACATTTTGGATGGAAGCTCTTACATGAAAGCTGCTAAGAAGTTGCATGAGATGGATCCATTGCAGAAGCCTAAACAAGATCGCTATGCGCTTAGGACTTCGCCGCAATGGCTTGGCCCTTTGATTGAAGTGATTAGGTTCTCAACCAAGTCAATTGAGAGGGAGATTAACTCTGTGAATGACAACCCTTTGATTGATGTATCAAGGAATAAGGCCTTGCATGGTGGTAACTTCCAAGGAACCCCTATTGGAGTCTCTATGGATAACACTCGTTTGGCTCTTGCATCAATTGGTAAACTCATGTTTGCTCAATTCTCAGAGCTTGTCAATGATTTCTACAACAATGGTTTGCCTTCAAACCTCTCTGCCAGTAGGAACCCCAGCTTGGATTATGGTTTCAAGGGTGCAGAAATTGCCATGGCTTCTTATTGTTCTGAACTGCAATACCTTGCAAACCCAGTGACAAGCCATGTGCAAAGTGCTGAGCAGCACAACCAAGATGTGAACTCTCTAGGTTTGATTTCTTCTAGGAAGACAAACGAGGCGATCGAGATCCTGAAGCTCATGTCTTCCACTTTCTTGATTGCACTTTGCCAAGCCATTGACTTGAGGCATCTGGAGGAGAATTTGAAGAGCACTGTCAAGAACACAGTGAGCATAGTTTCCAAGAGGACTCTTACCACAGGTGTCAATGGAGAGCTCCATCCTTCAAGATTCTGTGAGAAAGACCTGCTGAAAGTAGTTGATAGGGAGCATGTATTTGCCTACATTGATGATCCTTGCAGTGCCACATACCCGTTGATGCAGAAACTGAGGCAAGTGCTTGTGGAACATGCATTGGTAAATGCAGAGAGTGAGAAGAACTTGAACACATCAATCTTCCAGAAGATTGCAACTTTTGAGGAGGAGTTGAAGACCCTCTTGCCAAAGGATGTTGAAGGTGCAAGGCTTGCTTATGAGAGTGGGAAATCACCAATTCCAAACAAGATCAAAGAATGCAGGTCATACCCACTTTACAAGTTTGTGAGAGAGGAGTTGGGAACTGGGTTGCTCACTGGGGAAAAGGTCAGGTCACCAGGTGAAGAGTGTGACAAAGTGTTCACAGCAATGTGCCAGGGAAAAATCATTGATCCTCTTCTGGAATGCCTTGGGGAGTGGAACGGTGCTCCTCTTCCAATTTGTTAG 2181 0.4901 MEPITMTHQDVSSFCLPSKTATTTTNGVVGSDPLNWGVAAESLKGSHLDEVKRMVAEYRKPVVKLGGETLTISQVAAIAAQEHQGGEVRVELSESARAGVKASSDWVMDSMNNGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSRAVGPSGETLNAKQAFQLAGINSDFFDLQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKSTVKNTVSIVSKRTLTTGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLMQKLRQVLVEHALVNAESEKNLNTSIFQKIATFEEELKTLLPKDVEGARLAYESGKSPIPNKIKECRSYPLYKFVREELGTGLLTGEKVRSPGEECDKVFTAMCQGKIIDPLLECLGEWNGAPLPIC* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2736 726 Gene3D - 23 272 IPR024083 -
Dod01g2736 726 CDD PAL-HAL 68 536 IPR001106 -
Dod01g2736 726 Pfam Aromatic amino acid lyase 70 545 IPR001106 -
Dod01g2736 726 Gene3D - 539 660 IPR023144 -
Dod01g2736 726 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 32 715 IPR005922 GO:0005737|GO:0006559|GO:0016841
Dod01g2736 726 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 208 224 IPR022313 GO:0016841
Dod01g2736 726 Gene3D Fumarase/aspartase (Central domain) 273 721 - -
Dod01g2736 726 PANTHER HISTIDINE AMMONIA-LYASE 21 726 IPR001106 -
Dod01g2736 726 SUPERFAMILY L-aspartase-like 32 726 IPR008948 GO:0003824
Dod01g2736 726 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 21 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2736 Dod-Chr1 67048859 67052779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2736 24 726 Monolignol Biosynthesis Gene Families AT2G37040 84.233 0.0 1251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2736 K10775 - gmx:100811101 1284.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2736 01 67048859 67052779 Dod06g1049 06 13455577 13461267 ECH
Dod01g2736 01 67048859 67052779 Dod01g2736 01 67048859 67052779 ECH