Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2732 ATGATAAAGTTTATGGAGTCAAAGGAGAAACTGAAAGAGGTGGAAAGGTGTTTGGATCCTGAGCTATGGCACGCTTGTGCTGGAGGTATGGTTCAAGTGCCAGAGGTGAATGCTAAGGTGTGCTACTTCCCCCAAGGACATGCTGAGAGTGCATGTGGACCCGTGGAATTGGGGCCTTACCTCGAAATTCCACCATTCATTCAATGCACACTTGCTGCTATCAAGTATATGGCTGATCCTGACACAGATGAGATCTATGCCAAACTCAGGCTTGTTCCTCTCAACAGTGATGATGCTGATTTTGATGACGATGATGTTGGTGTTGGTGTTGGAGGCCTCAATGGTTCTGAAATAGATGATAAGCCACCTTCATTTGCAAAAACATTGACACAGTCTGATGCCAACAATGGTGGTGGCTTTTCTGTTCCTAGATACTGTGCTGAGACAATTTTCCCTCGTTTGGACTTTTCCGCAGACCCTCCTGTTCAGGTCATCCTTGTCAAGGACGTTCTTGGCCAAACATGGAAGTTCAGGCACATTTATAGGGGCTCACCGAAGCGGCATCTCTTGACAACTGGTTGGAGTAACTTTGTTAATCACAAGAAGCTTGTTGCTGGGGACTCAATTGTGTTCTTGAGAGCAGAAAATGGGGACTTGTGTGTTGGAATTCGGCGAGCTAGAAAGGGAATTGTTGGTGGAAGTGAGGCTTCTTCAGGGTGGAATAATCCTGCAGGTGGAATTCATCATTTGCCTTATGGAGGTTTTGGGGCCTTTTTTGGAGAGGGGGATAGCAGCCAACTCATGAGAAATGGTAATGTCAGCCCAAGTGCTAGTGTGATGATGGGGAAGGGGAAAGTGAGGGCTGAAGATGTTGTTGAAGCTGCAACTCTTGCTGCCAATAAGAAGCCCTTTGAGGTTGTTTACTACCCTCGGGCAGGCACTCCTAACTTTTGTGTGAGGGCCTCATTGGTTAGAGCAGCACTGCAGATTAGGTGGTATCCCGGAATGAGGTTCAAGATGCCCTTTGAACAGGAGGACTCCTTGCGGATCAGTTGGTCTATGGGAACCATAACTTCTGTTCAGGTTGCTAATCCAAGATGGCCCGACTCTCCTTGGAGACTTCTCCAGGTCACATGGGATGAGCCAGAGTTACATCAAAATGTGACAAGGGTGAGCCCGTGGCTGGTTGAATTGGTACCAAGCATGCCTGCACTCAATCTTCCTCCTTTCTCACCTCGAAAGAAATTGAGATTGCCTCAACCCCCAGATTTTCCCCTTGATGGCCAAATTCCTTTGCCAGCATTTCCAAGCAACCTTTTAGTTCCGAGCAACCCCTTTGGTTGTCTACCTGAAAGTACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCATTATGGTATATCCTTATCGGATCTCCACCTCAATAAACTACAGTCAGGTCTATTGTCGGTTGGTTTCGCACCAATTAATCGCACTGCGACACCAGTGAAGGTCTCCAATAACCAAACATTGCAAAAGGCTAGCACAAGTGACAATGTCTCTTGCTTAATGTCCATGGCAAGTTCTTCACAGTCTTCAAAGAAACTGGATGATGCAAAGGCACCCCAACTCGTGCTTTTTGGAAAAAGAATTCTTACTGAGAGACAAATCTCTTTGAGCAGGTCTGCTGACACAGTCTCCCCAGTTCTCAATGGAAATAGTTCATCTCATGGAAATGCTGATAAAATGAACAATTTGTCAGATGGTTCTGGATCTATTTTTCATCAAAAAGACTAG 1776 0.4634 MIKFMESKEKLKEVERCLDPELWHACAGGMVQVPEVNAKVCYFPQGHAESACGPVELGPYLEIPPFIQCTLAAIKYMADPDTDEIYAKLRLVPLNSDDADFDDDDVGVGVGGLNGSEIDDKPPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDFSADPPVQVILVKDVLGQTWKFRHIYRGSPKRHLLTTGWSNFVNHKKLVAGDSIVFLRAENGDLCVGIRRARKGIVGGSEASSGWNNPAGGIHHLPYGGFGAFFGEGDSSQLMRNGNVSPSASVMMGKGKVRAEDVVEAATLAANKKPFEVVYYPRAGTPNFCVRASLVRAALQIRWYPGMRFKMPFEQEDSLRISWSMGTITSVQVANPRWPDSPWRLLQVTWDEPELHQNVTRVSPWLVELVPSMPALNLPPFSPRKKLRLPQPPDFPLDGQIPLPAFPSNLLVPSNPFGCLPESTPAGMQGARHAHYGISLSDLHLNKLQSGLLSVGFAPINRTATPVKVSNNQTLQKASTSDNVSCLMSMASSSQSSKKLDDAKAPQLVLFGKRILTERQISLSRSADTVSPVLNGNSSSHGNADKMNNLSDGSGSIFHQKD* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2732 591 Gene3D - 123 226 IPR015300 -
Dod01g2732 591 Pfam Auxin response factor 294 376 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Dod01g2732 591 PANTHER AUXIN RESPONSE FACTOR 6 586 - -
Dod01g2732 591 SUPERFAMILY DNA-binding pseudobarrel domain 119 227 IPR015300 -
Dod01g2732 591 SMART B3_2 125 227 IPR003340 GO:0003677
Dod01g2732 591 Gene3D - 332 403 - -
Dod01g2732 591 CDD B3_DNA 123 225 IPR003340 GO:0003677
Dod01g2732 591 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 586 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dod01g2732 591 Pfam B3 DNA binding domain 125 226 IPR003340 GO:0003677
Dod01g2732 591 ProSiteProfiles B3 DNA-binding domain profile. 125 227 IPR003340 GO:0003677
Dod01g2732 591 MobiDBLite consensus disorder prediction 555 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2732 Dod-Chr1 66944701 66947039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2732 14 581 B3 DNA Binding Superfamily AT4G30080 53.793 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Dod01g2732 B3 5.4e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2732 - - fve:101313821 839.721