Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2731 ATGGCAAAGGACATAGAACCGGCTGCGGCGGCGAGTGAGCTTGCTCACCACAAGGACTACCACGACCCGCCACCGGCACCACTCTTCGACGCCAATGAGCTCCGCAAGTGGTCCTTCTACAGGGCCCTCATCGCAGAATTCGTTGCCACCCTCCTCTTCCTCTACGTATCCGTCTTAACCGTCATCGGTTACAACAGCCAGATCGACCCCGCCAACAAGGGCACCCCTTGTGACGGCGTCGGCATCCTCGGCATCGCTTGGGCCTTCGGCGGCATGATCTTCGTTCTAGTCTACTGCACCGCCGGCATCTCCGGGGGTCACATAAATCCTGCGGTGACGTTTGGGCTGTTCCTGGCTCGGAAGGTGTCGCTGTTGAGGGCGGTTCTGTACACAGTGGTGCAGTGCTTGGGGGCCATATGCGGTGTTGGGCTGGTGAAGGGTTTTCAGAGGAGCTACTACAACAGGTACGGAGGTGGCGCCAACAAGCTATCTGAAGGTTACAGCAAAGGAACAGGGTTGGGTGCTGAGATTATCGGAACCTTTGTTCTTGTCTACACCGTCTTCTCTGCCACCGATCCCAAGAGAAACGCCAGAGACTCCCATGTCCCCGTATTAGCACCACTTCCAATTGGGTTTGCGGTGTTCATGGTTCACTTGGCCACCATCCCCATCACCGGCACCGGCATTAATCCTGCTAGAAGCTTTGGAGCTGCTGTCATTTACAACAACGACAAGGCTTGGGATGACCAGTGGATTTTCTGGGTTGGACCCTTTGTTGGTGCTGCCATTGCTGCGATCTACCACCAGTTCGTGTTGAGAGCTCAGGCGGCGAAGGCTCTTGGTTCTTTTAGGAGCTCCTCGAACCTGTAA 870 0.5598 MAKDIEPAAAASELAHHKDYHDPPPAPLFDANELRKWSFYRALIAEFVATLLFLYVSVLTVIGYNSQIDPANKGTPCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRAVLYTVVQCLGAICGVGLVKGFQRSYYNRYGGGANKLSEGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDQWIFWVGPFVGAAIAAIYHQFVLRAQAAKALGSFRSSSNL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2731 289 ProSitePatterns MIP family signature. 107 115 IPR022357 -
Dod01g2731 289 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g2731 289 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g2731 289 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g2731 289 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g2731 289 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g2731 289 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g2731 289 PANTHER AQUAPORIN PIP2-4-RELATED 1 286 - -
Dod01g2731 289 SUPERFAMILY Aquaporin-like 32 273 IPR023271 -
Dod01g2731 289 Gene3D Glycerol uptake facilitator protein. 26 289 IPR023271 -
Dod01g2731 289 CDD MIP 41 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g2731 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 286 IPR034294 -
Dod01g2731 289 TIGRFAM MIP: MIP family channel proteins 45 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g2731 289 Pfam Major intrinsic protein 33 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2731 Dod-Chr1 66917107 66918986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2731 1 289 Major Intrinsic Protein MIP AT2G37170 79.931 7.03e-172 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2731 K09872 - rcu:8284532 504.212