Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2728 ATGCGAGGAGAGAGGGAGTTTGTGGCTGAATTGGCTACACTAGCAAACATCAAGCACCAAAATTTGGTCCTTCTTAGAGGCTGTTGTGTAGAGGGAGCCCACAGATATTTAGTCTACGATTACATGGAGAATAACAACCTTCATCACACTTTTTTAGGTTCAGAGCATAGTAGGATGAGATTCAAGTGGGAAGCAAGGAGGGATGTGTCCATAGGTGTGGCCCGTGTGCTTGCCTTTCTACACGAGGAACTCAAGCCCCATATTGTGCACAGAGATATCAAAGCCAGCAACATCCTTCTTGATGGAAATTTCACACCAAAAGTTTCGGACTTTGGTTTGGCAAGGCTACTAAGAGATGAGAAGTCCTACATCAGCACCCGGGTAGCTGGGACATTTGGTTATCTTGCTCCGGAGTATGCCAGTTCTGGACAAGTGACCCGAAAATCAGATGTTTATAGCTTTGGAGTACTACTCTTAGAAATTGTCAGTGGCCGAGCCGTGGTAGATGCCTTCCAAGACATTGATCGTTTCATAGTAGAGAAGGCTTGGGCTGCATATGAATCTAATGATCTAATGAGAATGGTTGATCCCGTGCTGGACATTCACCATCGCGTGGAAGAAGTGAAACGTTTCCTAATGGTGGGGCTGCGTTGCGTGCAAGAAACCGCCAAGCTTAGGCCCCGTATGTCCGAGGTTGTAGAAATGTTGACTAACAACATTGACATGAACGATGTTCACATTTCAAAGCCCGGTTTTGTTGGGGATCTTAGGAATATTAGAATCAAGAAGCAAACGCAATCATCGGAAGAATTAAGTTGTAGTGGAGCAGGAGCAAGTTCAATATGGAGCACGACCGATCTTGCCCGTTAG 870 0.4563 MRGEREFVAELATLANIKHQNLVLLRGCCVEGAHRYLVYDYMENNNLHHTFLGSEHSRMRFKWEARRDVSIGVARVLAFLHEELKPHIVHRDIKASNILLDGNFTPKVSDFGLARLLRDEKSYISTRVAGTFGYLAPEYASSGQVTRKSDVYSFGVLLLEIVSGRAVVDAFQDIDRFIVEKAWAAYESNDLMRMVDPVLDIHHRVEEVKRFLMVGLRCVQETAKLRPRMSEVVEMLTNNIDMNDVHISKPGFVGDLRNIRIKKQTQSSEELSCSGAGASSIWSTTDLAR* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2728 289 Gene3D Phosphorylase Kinase; domain 1 1 42 - -
Dod01g2728 289 Pfam Protein tyrosine and serine/threonine kinase 4 236 IPR001245 GO:0004672|GO:0006468
Dod01g2728 289 PIRSF ILK 2 247 - -
Dod01g2728 289 PANTHER RECEPTOR-LIKE KINASE 1 264 - -
Dod01g2728 289 Gene3D Transferase(Phosphotransferase) domain 1 43 249 - -
Dod01g2728 289 SUPERFAMILY Protein kinase-like (PK-like) 5 249 IPR011009 -
Dod01g2728 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 88 100 IPR008271 GO:0004672|GO:0006468
Dod01g2728 289 SMART serkin_6 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2728 289 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 264 - -
Dod01g2728 289 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2728 Dod-Chr1 66862422 66864912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2728 2 255 Receptor kinase-like Gene Family AT1G56120 47.843 2.88e-76 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod01g2728 PK_Tyr_Ser-Thr 5.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2728 - - gmx:100813945 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2728 01 66862422 66864912 Dod01g2728 01 66862422 66864912 ECH