Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2716 ATGGACAAGGATACTAGCTCAGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGATGAGGAGCTAATTGTTCACTATCTAAGAAACAAAGTGACTTCATCTCCCCTTCCTGCTTCATTCATAGCAGAAATAGACCTTTACAAGTATAATCCATGGGATCTCCCAAGCAAAGCTTTGTTTGGGGAAGACGAGTGGTATTTCTTTACTCCTAGGGACAGGAAGTACCCCAACGGAGTGAGGCCTAATAGAGCAGCTGGTTCAGGTTATTGGAAGGCTACTGGAACTGACAAACCAATTATTGCTTCCTGTGGGATGAAGAGCATTGGAGTGAAGAAGGCCCTTGTGTTCTACAAGGGGCGTCCCCCAAAAGGATCTAAAACTGACTGGATCATGCATGAGTATAGGTTGCAAGATTCACTGGTCTCAAAGTCCAAGCAAAGAGGCTCTATGAGACTGGATGAGTGGGTGCTATGCCGAGTTAGACAGAAAGCCAGCAGCATGAGACATACTTGGGAAGATTCAAATGAACTTAGTTATGAACCAACAAACAACTTTCAACAAATGAATGGGAACTATAGTCCTGAACCAGTTAAAAGCTCTGTGCACAATGAATTTCCAATGTTGCCTTATATTCTGGCCTCTAGGAGTACTTTGCCTAATTCTGTTGGTATGGCCTCAAGCACAAGCTTTGCTTGTAATGATGATATCAAAGCATATGCTTCAGTGCATGAAGACAATTTAAATGTAATAGGAGCACAGTTCCTAGCATCAGCAGCGGAGAGCTTGTACAATCCGCTGAAGAGAAAAGCCATTGAAGAAAATCAGTTGGAATATGCTCCCCCCAACAAAAAACTAAGCCTAGGAGTTGATGATAAGCAAAGACTTGTGATAGATCATGTAAGCAAAGGCTACAATTTCAGCAACTTTGATCAGTGGACTCCCATAATACAACCTCAAGAGCTTAATAGCTTAGCCTTTACGGGATATACTTGA 999 0.4244 MDKDTSSEIQLPPGFRFHPSDEELIVHYLRNKVTSSPLPASFIAEIDLYKYNPWDLPSKALFGEDEWYFFTPRDRKYPNGVRPNRAAGSGYWKATGTDKPIIASCGMKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLQDSLVSKSKQRGSMRLDEWVLCRVRQKASSMRHTWEDSNELSYEPTNNFQQMNGNYSPEPVKSSVHNEFPMLPYILASRSTLPNSVGMASSTSFACNDDIKAYASVHEDNLNVIGAQFLASAAESLYNPLKRKAIEENQLEYAPPNKKLSLGVDDKQRLVIDHVSKGYNFSNFDQWTPIIQPQELNSLAFTGYT* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2716 332 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Dod01g2716 332 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Dod01g2716 332 Gene3D NAC domain 20 170 IPR036093 GO:0003677|GO:0006355
Dod01g2716 332 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Dod01g2716 332 PANTHER NAC TRANSCRIPTION FACTOR 56 2 286 - -
Dod01g2716 332 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2716 Dod-Chr1 66605103 66606308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2716 4 168 NAC Transcription Factor Family AT1G69490 68.485 3.01e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod01g2716 NAM 4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2716 - - gmx:100788799 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2716 01 66605103 66606308 Dod01g2716 01 66605103 66606308 ECH