Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2715 ATGAGCGTGATTGACATCCTCACGAGGGTCGATTCCATTTGCAAGAAGTACGACAAATACGACCTCGACAAGCAGAAGGACTCCAACATCTCCGGCGACGATGCCTTCGCCAGGCTCTACGCCGTCGTCGACCAAGACATCGAAGCCTTGATCCAGAAAGCTGAGACAGCTTCGAAGGAGAAAGGGAAGGCTTCTGCTGTAGCAATCAATGCGGAGATTCGTCGTACAAAGGCTAGGTTGCTGGAGGAGGTCCCCAAGTTGCAGAGGTTAGCTGTAAAGAAGGTAAAGGGGCTTTCATCAACAGAATTTGCTGCCCGCAATGATTTGGTTCTTGCATTGCCAGAGAGGATCCAAGCTATCCCAGATGGGACACCTGCTGCACCCAAGCAAACTGGGGGTTGGGCTGCTTCTGCCTCACGTCCTGAAATTAAATTTGATTCTGATGGGCGTTTTGACGATGAATACTTCCAACAAACCGAGGAATCAAGTCGGTTCAGGCAGGAGTATGAAATGCGTAGAATGAAACAGGATCAAGGTTTGGATGTGATAGCTGAAGGATTGGATACTTTGAAAAACATGGCACATGATATGAATGAGGAGATGGATAGACAAGTACCTCTGATGGACGAGATTGACACTAAGGTGGACAAGGCATCAGCTGACCTTAAGAATACCAATGTTAGACTTAAAGACACAGTGAACCAGCTTCGGTCCAGTCGGAACTTCTGTATTGATATTATTTTGTTGATTATAATTTTGGGAATAGCTGCCTATTTATACAACGTGCTAAAGAAGTAA 798 0.4612 MSVIDILTRVDSICKKYDKYDLDKQKDSNISGDDAFARLYAVVDQDIEALIQKAETASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSTEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRPEIKFDSDGRFDDEYFQQTEESSRFRQEYEMRRMKQDQGLDVIAEGLDTLKNMAHDMNEEMDRQVPLMDEIDTKVDKASADLKNTNVRLKDTVNQLRSSRNFCIDIILLIIILGIAAYLYNVLKK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2715 265 PANTHER SYNTAXIN 1 261 IPR045242 -
Dod01g2715 265 Pfam SNARE domain 207 256 IPR000727 -
Dod01g2715 265 PANTHER SYNTAXIN-73 1 261 - -
Dod01g2715 265 CDD SNARE_Qc 175 230 - -
Dod01g2715 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Dod01g2715 265 SUPERFAMILY SNARE fusion complex 165 230 - -
Dod01g2715 265 Gene3D - 170 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2715 Dod-Chr1 66600901 66604203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2715 1 264 SNARE and Associated Proteins AT3G09740 77.068 5.67e-156 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2715 K08506 - gmx:100819272 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2715 01 66600901 66604203 Dod01g2715 01 66600901 66604203 ECH