Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2712 ATGGCCGATGATGATTTCGAGTTCGCCGATAAAGTCCCTCCTTCCTTCGATCGCGTGGGAAATGTGATTAAGGATGCTGGATCCAAAGGGTTCAACCCAGCCTTAATAGTTCTCCTGGTTGTTTTTGGGTTGGTACTTGCATTCCTCGTCGGAAATTATGTGCTCTACACGTATGCACAGAAGACCCTCCCTCCTAGGAAAAAGAAGCCAGTGTCAAAGAAGAAGATGAAAAAGGAGAGACTTAAGCAAGGTGTCTCCGCACCTGGAGAGTAG 273 0.4725 MADDDFEFADKVPPSFDRVGNVIKDAGSKGFNPALIVLLVVFGLVLAFLVGNYVLYTYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2712 90 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 4 90 - -
Dod01g2712 90 Pfam DNA binding protein S1FA 27 90 IPR006779 GO:0003677|GO:0005634|GO:0006355
Dod01g2712 90 MobiDBLite consensus disorder prediction 65 90 - -
Dod01g2712 90 MobiDBLite consensus disorder prediction 66 80 - -
Dod01g2712 90 PANTHER DNA-BINDING PROTEIN S1FA2 4 90 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2712 Dod-Chr1 66555503 66557696 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Dod01g2712 S1FA 1.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2712 - - gmx:100499820 143.28