Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2704 ATGGGGGGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGCCCTGACTCAAAGGAGAAGAAAGATAAGAAATCAAGTAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAGTTGCAGACTTCAGGCTCATATCCTGAAACTGATAAATCACCACCTCTTCCTCCACCAGAAGATGTTAAATTAACTGATCTTGAAATTGAAAGCAGTAGTCATGATCATGTTGTTGAAGTTGCAATTGCCACAGATGCTGTGGCACCTGTTCCTGCTGTTCAGACAGCACCAGTTAGGGTTGAAGCTGCTAGAATAGCTAAGTTTGCTGGTAAACCAACGGAAGAAGTGGCAGCAATCAAGATTCAAACAGCTTTCCGGGGATACTTGGCAAGAAGAGCACTGCGGGCTTTAAGAGGGCTGGTCAGGTTGAAATCATTGATGGAAGGGCCCATTGTTAAACGCCAAGCCACAAGTACCCTCCGCTCAATGCAGACTTTAGCTCGTGTGCAAGCTCAGATTCGCTCTAGGAGGATCAGAATGTTTGAGGAGAATCAGGCTCTGCAGAGACAGCTCTTACAGAAGCATGCAAAAGAGCTTGAGAGCATGCGGATTGGGGAGGAATGGGATGACAGCTTACAATCAAAAGAACAAATTGAAGCCAAGTTACTAAGCAAGTATGAGGCTACTATGAGAAGAGAAAGAGCACTGGCTTATGCATTCACCCATCAGCAAAACTGGAAGAACTCATCTAGATCTATAAATCCAATGTTCATGGATCCAACCAATCCAAGCTGGGGATGGAGCTGGTTGGAACGATGGATGGCAGCTCGACCTTGGGAGAGCCGTAGCCTGATGGATAAAGAGCTGAATGACCATGCATCTGTAAAAAGTTCGAGCCGCAGCATTACTGCTGGGGAAATCAGCAAATCATTTGCCCGTTTCCAGCTCAATTCTGAAAAGCAGTCTCCAACAGCCAGCCAGAATCCTGGCTCACCTAGCTTTCAGTCCAATTCAGCTCCTCCCAAACCAGCTTCTCCAGCAACTGCTAAGAAACTGAAGAAGGGAAGCCCAAGAGGTAGCTGGGTTATGGATGATGACTCCAAAAGCATGGCCAGTGTACAGTCAGACCGGTTCCGGAGGCACTCTATTGCGGGGTCATCAGTGAGGGATGATGAGAGCCTTGCTAGCTCTCCATCAGTTCCGAGTTACATGGTGCCAACTCAATCTGCGAAAGCCAAGTCCAGGACACAAAGTCCATTAGCCACGGAACATGGGAAAACAGAGAAGGGGTCCTTTGGGACCGCAAAGAAACGTCTCTCTTTCCCAGCTTCACCTGCCAGACCAAGGCGGCACTCAGGACCACCAAAAGTAGAAAGCAGCTTAAATGCAGAATTTACTGTGAGCAATGGTGTGGCAAGTTGA 1419 0.4722 MGGKGNWFSSVKKALSPDSKEKKDKKSSKSKKKWFGKQKLQTSGSYPETDKSPPLPPPEDVKLTDLEIESSSHDHVVEVAIATDAVAPVPAVQTAPVRVEAARIAKFAGKPTEEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPIVKRQATSTLRSMQTLARVQAQIRSRRIRMFEENQALQRQLLQKHAKELESMRIGEEWDDSLQSKEQIEAKLLSKYEATMRRERALAYAFTHQQNWKNSSRSINPMFMDPTNPSWGWSWLERWMAARPWESRSLMDKELNDHASVKSSSRSITAGEISKSFARFQLNSEKQSPTASQNPGSPSFQSNSAPPKPASPATAKKLKKGSPRGSWVMDDDSKSMASVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMVPTQSAKAKSRTQSPLATEHGKTEKGSFGTAKKRLSFPASPARPRRHSGPPKVESSLNAEFTVSNGVAS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2704 472 Pfam IQ calmodulin-binding motif 116 134 IPR000048 GO:0005515
Dod01g2704 472 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 468 - -
Dod01g2704 472 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Dod01g2704 472 SMART iq_5 112 134 IPR000048 GO:0005515
Dod01g2704 472 MobiDBLite consensus disorder prediction 458 472 - -
Dod01g2704 472 MobiDBLite consensus disorder prediction 1 59 - -
Dod01g2704 472 MobiDBLite consensus disorder prediction 316 472 - -
Dod01g2704 472 PANTHER IQ-DOMAIN 5-RELATED 1 468 - -
Dod01g2704 472 Gene3D iswi atpase 110 137 - -
Dod01g2704 472 MobiDBLite consensus disorder prediction 316 342 - -
Dod01g2704 472 Pfam Protein of unknown function (DUF4005) 389 452 IPR025064 -
Dod01g2704 472 MobiDBLite consensus disorder prediction 388 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2704 Dod-Chr1 66473395 66477625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2704 1 472 IQD Protein Family AT5G03040 53.704 1.09e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2704 - - gmx:100800080 706.827