Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2696 ATGCACAGAACTCGGGAAGAGGCGCCGCCGCCGCAGCAGCAGCAGCAGAGGTTTGGATATGGAAGCTCGAGCTCCTCCTCCTCCACCTTTCCGTTCGGTTTACTGTATATATTTGACGTTTACTTTCCTCAGCAACTCTTCAGTGTCCAAGAATCCTGGCTCAACCTCACTTCTGCTCTTCTTTCCTTCTTCTCTTCTCCAGAGGGCCAAAACGTCGTTTCTCAGGTGAAAAATGATTATGGAAACTTTGTCTTGTCGGTAGACTTTCAGCAGCTCAAACAAATATGTCATGTTGAGGAGTTTTATGAAATGTTTGAGGAGAAACCTAGAATTGCTCTCTTATGCATGAGTGCTGCAGTTCACAAGGTTTTGCTTTCCAAATTGGAGAATGACAAGATGGAGCTTGGTGCAAAAGTAGATATCCGTCTTCATAATTGTGCTGAAACTATGATTGCTCTGAAGAACTTAAAAGCAGCTTACATTGACAAGCTTGTCTCAGTTCGTGGTACTTCTGTGAAGGTCAGCACTGTCAGGCCTCTTGTGGTAGAAATGAGCTTTGAATGCAGTAAGTGTAAACTAACAATTACACGTATATTTCCTGAAGGGAAATATTCACCTCCATCAATTTGTAATTTGAATGGCTGCAAGAGCAAAATCTTTAATCCATTGCGATCTACTGCTCAAACCATTGATTTTCAAAAAATAAGAGTTCAAGAATTATTAAAACCTGGAGACCACGAAGAAGGACGGGTGCCTCGAACAGTGGAATGTGAGCTTACCCAAGATCTTGTTGATGCATGCATACCTGGAGATGTAGTGACTGTTACTGGAATTATAAGGGGAATTAATAATTACATGGATATTGGTGGAGGGAAGTCAAAAAACAGAAACCAGGGATTTTATTATTTGTATCTGGAAGCTGTATCCATAAAAAATTCAAAGTCTCAGTCCACTTCTGAGGATCTGCAAGAATCTAATCCCAAAGCCAGACCAACTGAGCTTTTTGATCTGTTTTCATTCTCTTCAAGAGATTTAGAATTTGTTGTGAAGTTTGCAGAGGAGCACGGTTCAGATTTATTTCGGCAAATCCTTCAATCTATATGCCCATCCATCTATGGGCATGAGCTTGTTAAAGCTGGGATAACTCTGGCATTATTTGGAGGTGTACGAAAGCATTCTATGGATCCAAATAAGGTTCCTGTAAGGGGAGACATTCATGTCATAATTGTTGGTGATCCTGGTCTGGGTAAAAGCCAATTGCTACAAGCAGCTGCAGCTGTTTCTCCACGTGGTATCTATGTCTGTGGGAATGCCACAACCAGAGCTGGCCTCACTGTAGCTGTAGTGAAGGATCCTATGACAAGTGACTATGCTTTTGAGGCTGGTGCTATGGTGCTGGCTGACAGTGGATTGTGCTGTATCGATGAGTTTGACAAAATGTCATCGGACCACCAGGCATTACTGGAGGCAATGGAGCAACAGTGTGTATCTATTGCAAAGGCGGGGTTAGTAGCAAGTTTATCATCTCGGACTTCTGTCTTAGCAGCTGCAAACCCTGTTGGTGGTCATTACAACCGGGCAAAAACTGTAAATGAAAATTTGAAAATGAGTGCTGCTCTTCTGTCTCGTTTTGATTTAATTTTCATACTGCTGGACAAACCTGATGAATTTCTGGACAAGCGAGTCTCGGAGCACATTATGTCTCTTCATGCTGGGAGTGGACAAAATTCACTGGCATTGAAAAAGCGACGTGGAGATCCGCCCTCTGATTCAAGAACTGTTGTATCACAGAATGCTGAAGGTGTAAATTTGGGTGTTAGATCTGGTTCTTTGGTTTCAAGGTTGAGACTTGACCCACAAAGAGATGGAGATTTTGTTCCATTACCTGGTCAACTTCTTCGTAAATACATTGCTTATGCAAGGACTTTTGTATTTCCTAGGATGTCGAAGCCAGCCGCAGATATCCTACAAAAGTTTTACCTTGAACTGAGAGATCATAATACTTCAGCTGATGGCACTCCTATAACTGCAAGGCAACTGGAAAGTCTAGTAAGGCTGGCTGAAGCTCGAGCTCGGCTGGACTTGAGAGTAGAAATAACGGCCCAGGATGCAATGGATGTTGTAGAAATCATGAAGGAATCCTTGTATGATAAATATGTTGATGAGCATGGTTTTGTTGATTTTGGTCGAAGTGGGGGGATGAGTCAACAGAAGGAGGCAAAACGCTTTCTTAATGCCCTTAACAAGCAATCGGAACTGGAACAGAAAGATTGCTTTTCAGTAGCTGAGATATACAATCTGGCTGATAGGATTTCCTTGAAAGTTCCTGATATTGACACTTTCATCGATAATTTAAACAGCGTTGGTTATCTACTCAAAAAAGGACCAAAGACATACCAGGTGCTATCCTCTTCCTATACACGAAGCCAATCATTTAGGTCTTAG 2445 0.4213 MHRTREEAPPPQQQQQRFGYGSSSSSSSTFPFGLLYIFDVYFPQQLFSVQESWLNLTSALLSFFSSPEGQNVVSQVKNDYGNFVLSVDFQQLKQICHVEEFYEMFEEKPRIALLCMSAAVHKVLLSKLENDKMELGAKVDIRLHNCAETMIALKNLKAAYIDKLVSVRGTSVKVSTVRPLVVEMSFECSKCKLTITRIFPEGKYSPPSICNLNGCKSKIFNPLRSTAQTIDFQKIRVQELLKPGDHEEGRVPRTVECELTQDLVDACIPGDVVTVTGIIRGINNYMDIGGGKSKNRNQGFYYLYLEAVSIKNSKSQSTSEDLQESNPKARPTELFDLFSFSSRDLEFVVKFAEEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKHSMDPNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTRAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSSDHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDEFLDKRVSEHIMSLHAGSGQNSLALKKRRGDPPSDSRTVVSQNAEGVNLGVRSGSLVSRLRLDPQRDGDFVPLPGQLLRKYIAYARTFVFPRMSKPAADILQKFYLELRDHNTSADGTPITARQLESLVRLAEARARLDLRVEITAQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSVAEIYNLADRISLKVPDIDTFIDNLNSVGYLLKKGPKTYQVLSSSYTRSQSFRS* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2696 814 Pfam MCM OB domain 153 281 IPR033762 -
Dod01g2696 814 PRINTS Mini-chromosome maintenance (MCM) protein family signature 489 502 IPR001208 GO:0003677|GO:0005524|GO:0032508
Dod01g2696 814 PRINTS Mini-chromosome maintenance (MCM) protein family signature 402 417 IPR001208 GO:0003677|GO:0005524|GO:0032508
Dod01g2696 814 PRINTS Mini-chromosome maintenance (MCM) protein family signature 462 476 IPR001208 GO:0003677|GO:0005524|GO:0032508
Dod01g2696 814 PRINTS Mini-chromosome maintenance (MCM) protein family signature 540 548 IPR001208 GO:0003677|GO:0005524|GO:0032508
Dod01g2696 814 PRINTS Mini-chromosome maintenance (MCM) protein family signature 513 525 IPR001208 GO:0003677|GO:0005524|GO:0032508
Dod01g2696 814 MobiDBLite consensus disorder prediction 8 24 - -
Dod01g2696 814 SMART mcm 149 716 IPR031327 GO:0003677|GO:0005524|GO:0032508
Dod01g2696 814 SUPERFAMILY Nucleic acid-binding proteins 80 283 IPR012340 -
Dod01g2696 814 Pfam MCM AAA-lid domain 632 715 IPR041562 -
Dod01g2696 814 Gene3D - 180 230 - -
Dod01g2696 814 Gene3D - 153 282 IPR012340 -
Dod01g2696 814 MobiDBLite consensus disorder prediction 1 24 - -
Dod01g2696 814 PANTHER DNA HELICASE MCM8 18 811 - -
Dod01g2696 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 721 IPR027417 -
Dod01g2696 814 CDD MCM8 363 714 - -
Dod01g2696 814 ProSiteProfiles MCM family domain profile. 359 566 IPR001208 GO:0003677|GO:0005524|GO:0032508
Dod01g2696 814 Pfam MCM P-loop domain 357 570 IPR001208 GO:0003677|GO:0005524|GO:0032508
Dod01g2696 814 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 18 811 IPR031327 GO:0003677|GO:0005524|GO:0032508
Dod01g2696 814 Gene3D - 337 724 IPR027417 -
Dod01g2696 814 SMART AAA_5 403 555 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2696 Dod-Chr1 66415646 66422773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2696 18 802 Core DNA Replication Machinery Family AT3G09660 70.923 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2696 K10737 - gmx:100784549 1351.27