Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2695 ATGGCCGACGGTCCGGCGAGTCCAGGCGGCGGCAGCCACGAGAGCGGGGAGCACAGCCCTCGCTCCAACATAAGGGAACAGGATAGGTTCCTTCCCATCGCCAACATCAGCCGCATCATGAAGAAAGCTCTTCCCGCCAACGGCAAAATCGCCAAGGATGCAAAGGAAACCGTTCAGGAATGCGTCTCCGAGTTCATCAGTTTCATCACCAGCGAGGCCTCTGATAAGTGTCAGAGAGAGAAGAGGAAGACGATCAATGGTGACGATTTGCTCTGGGCAATGGCCACTCTTGGTTTCGAGGATTATATTGATCCCTTGAAGATTTACCTCGCCAGATACAGAGAGATGGAGGGTGATACCAAGGGTTCAGCCAAGGGTGGAGACACGTCTGCCAAGAAAGATGTTCAACCAAGTCCTAATGCTCAGCTTGCTCATCAAGGTTCTTTCTCACAAGGTGTTAATTACACAAATTCTCAGGTAACACTACTCTATGTAATGCAATATACCTCTTTTTCCTGCGCTGTAATTTTGAATGCTGATGAATGA 546 0.4945 MADGPASPGGGSHESGEHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLARYREMEGDTKGSAKGGDTSAKKDVQPSPNAQLAHQGSFSQGVNYTNSQVTLLYVMQYTSFSCAVILNADE* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2695 181 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Dod01g2695 181 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 160 IPR027113 GO:0001228|GO:0006355|GO:0016602
Dod01g2695 181 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Dod01g2695 181 MobiDBLite consensus disorder prediction 1 26 - -
Dod01g2695 181 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 1 160 - -
Dod01g2695 181 SUPERFAMILY Histone-fold 27 130 IPR009072 GO:0046982
Dod01g2695 181 MobiDBLite consensus disorder prediction 120 145 - -
Dod01g2695 181 Gene3D Histone, subunit A 17 152 IPR009072 GO:0046982
Dod01g2695 181 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Dod01g2695 181 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Dod01g2695 181 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2695 Dod-Chr1 66409888 66414123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2695 7 160 CCAAT-HAP3 Transcription Factor Family AT2G37060 79.375 1.10e-84 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Dod01g2695 CBFD_NFYB_HMF 8.7e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2695 K08065 - gmx:100798667 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2695 01 66409888 66414123 Dod01g2695 01 66409888 66414123 ECH
Dod01g2695 01 66409888 66414123 Dod07g0844 07 12258600 12262564 PCT