Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2691 ATGTTGGATCTTAATCTCAACGCCGATTCCGCCTCCGGTTCAATCGACATGGCGCCGGTTCCGTTCTCCGGCAGCCTAATGGAAAGTTCCGGAAGCTTCAATTCCTCCGTAGCCAATGCCGACACCGAAGACTCCTGCTCTTACGGCGGCGACGCCGTCGCCTACAACTTCGCCATACTCAAGAACGCCACCGCCGACGACGGCACCGGAACCGGCGCCGGAGACGACGGTGGTGTCCGGACCATCCAGCTTTTTCCGGTGACCGGAGCGGTTGAGCGGTTACGTGGCTCGTCGTCGTCTAGGAGCAAGGGATGGTTGGATTTTGCGTCGAAGGAGGTGGATCACGGTGGTGGTGGTGTGGTGGCGGAGCAGAGGATCGTAGCTCAGAGGCCGCAGCAGGTGAAGAAGAGCCGCAGGGGACCGAGGTCGCGGAGCTCGCAGTATCGCGGCGTTACGTTCTATCGAAGAACCGGACGATGGGAATCGCATATTTGGGACTGTGGGAAACAAGTGTACTTGGGTGGATTTGATACAGCACATGCTGCAGCTAGGGCATATGATCGAGCTGCAATCAAGTTCCGCGGCATTGATGCAGATATCAATTTCAACGTCAGCGATTATGATGAAGACATAAAGCAGATGAGTAACTTCACAAAGGAAGAGTTTGTGCATATCTTGCGCCGGCAGAGCACTGGATTTTCAAGAGGAAGCTCCAAATACAGGGGAGTTACCTTGCATAAATGTGGCCGATGGGAAGCACGTATGGGGCAGTTTCTCGGGAAAAAGTATATCTATCTTGGGCTATTCGACAGCGAATTAGAAGCTGCAAGGGCATATGATAGGGCTGCTATAAAGTGCAATGGAAGGGAAGCAGTCACAAACTTTGAGCCCAGTTTATATGATGGGGAGGTGACTTCTCAGGCTGAGAATGAAGATAGCAAGCAGGGCCTTGATCTTAACTTGGGCATAGCTCCCCCTTCTTTCGCTGATGGTCAAGTCAATAACATACACAACCATGTGGGTGGTTTACAAGTTCAGCGTAGCTGGGATGACATCCCTATTGATAGGAGAGTTATGTTTGCGCAATCTGCATCAAGATCACTGAATGCTCAGCCATCTCATGGATTCTCCGTGGCATCTGAGCATCCTTCTGTCTGGGGTGGTACCAATTCCTTCCCCATCTATAAGGAGAGAGCAATAGAGAACATGATGGAAGCTGATCCCTTGCCAAATTGGGCATGGCAAGTCCAAGGTCATTATGGCGGGGCAACTCCGATTCCAGCGGTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACATTAATTCCACCAGCTGCGGATGGTCAAATTCATTTTCCAAACATGAGGTTCCTCTACCCTCATTTCCCTCCATCAATCGCTAATTCCAGCACCATATCCCCCTTCTACTGCAGGAGCTGA 1440 0.516 MLDLNLNADSASGSIDMAPVPFSGSLMESSGSFNSSVANADTEDSCSYGGDAVAYNFAILKNATADDGTGTGAGDDGGVRTIQLFPVTGAVERLRGSSSSRSKGWLDFASKEVDHGGGGVVAEQRIVAQRPQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGIDADINFNVSDYDEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDRAAIKCNGREAVTNFEPSLYDGEVTSQAENEDSKQGLDLNLGIAPPSFADGQVNNIHNHVGGLQVQRSWDDIPIDRRVMFAQSASRSLNAQPSHGFSVASEHPSVWGGTNSFPIYKERAIENMMEADPLPNWAWQVQGHYGGATPIPAVSAAASSGFPSTLIPPAADGQIHFPNMRFLYPHFPPSIANSSTISPFYCRS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2691 479 ProSiteProfiles AP2/ERF domain profile. 239 296 IPR001471 GO:0003700|GO:0006355
Dod01g2691 479 Pfam AP2 domain 147 195 IPR001471 GO:0003700|GO:0006355
Dod01g2691 479 Pfam AP2 domain 238 288 IPR001471 GO:0003700|GO:0006355
Dod01g2691 479 CDD AP2 238 298 IPR001471 GO:0003700|GO:0006355
Dod01g2691 479 SUPERFAMILY DNA-binding domain 238 297 IPR016177 GO:0003677
Dod01g2691 479 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 474 - -
Dod01g2691 479 SMART rav1_2 147 209 IPR001471 GO:0003700|GO:0006355
Dod01g2691 479 SMART rav1_2 239 302 IPR001471 GO:0003700|GO:0006355
Dod01g2691 479 ProSiteProfiles AP2/ERF domain profile. 147 203 IPR001471 GO:0003700|GO:0006355
Dod01g2691 479 CDD AP2 147 205 IPR001471 GO:0003700|GO:0006355
Dod01g2691 479 Gene3D AP2/ERF domain 238 297 IPR036955 GO:0003700|GO:0006355
Dod01g2691 479 Gene3D AP2/ERF domain 146 205 IPR036955 GO:0003700|GO:0006355
Dod01g2691 479 PRINTS Ethylene responsive element binding protein signature 240 251 IPR001471 GO:0003700|GO:0006355
Dod01g2691 479 PRINTS Ethylene responsive element binding protein signature 278 298 IPR001471 GO:0003700|GO:0006355
Dod01g2691 479 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 474 - -
Dod01g2691 479 SUPERFAMILY DNA-binding domain 146 205 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2691 Dod-Chr1 66361237 66364737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2691 127 322 AP2-EREBP Transcription Factor Family AT4G36920 78.894 2.08e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dod01g2691 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2691 K09284 - gmx:100808212 660.218