Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2681 ATGGACATTGAGAAAGCAGAAAGGGTAGTTGTTGCAAAGCCAGTTGCTTCAAGGCCAACTTGTTCTACTTTCAGATCCTTCTCGGAGCTCCTTGCAGGTGCCATCAATGACTCACCCCAACTTGAATCTTCTCAAGCTGCTGTTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCAGCACTGAATCGCACCCCTGCAGGGTTTCCTTCTTCTGAGGCTGACATTTTTGGAGTTGCACATAGTAATTCTTCTGACAAGAGTCTTACTCCTGACCCCAAACAATCCCTCATATACAAGCCAATGGCAAAACTTGTATCAAAGACAACTGTGTCTCTTTTGGCAAATATGGGAAATTGCAGTACAAGGCAGCAACAACCTCGGCAAGCAATGGAGGCCAGTCTTCAACATTTCCGCAATGAAAAAATTAGAACCAATATGAGCTCAAATATTCATCATCAGAGCGTCACACCACATGCTGACTCAACCCAGACTACTGAAACTTGCAAGATGGTGCAGCAGAACATAGAGGAGGACCAGAAGGTTTCAGCATCTGCGATGAATGGTGATAGGCCTTCTTATGATGGTTATAATTGGAGGAAATATGGGCAGAAGCAAGTGAAAGGAAGCGAGTACCCGCGGAGTTATTACAAGTGCACACATCCTAATTGTCCAGTGAAGAAGAAGGTTGAGAGATCATTGGATGGCCAGATTGCTGAAATTGTTTATAAAGGTGAACACAATCATCCAAAGCCGCAGCCTCCTAAGCGAAACTCGGCGGGGACACAAGTGTCAGGGATGGTGTCTGATGGAATGGTTCAAGATGTTTGGAGTAACAATCACAGTGAGAGGAATGAAAGCAATGATGGTAGGATACAGAACCAGAATGACACAGGGCTGCATTCAGCTTATCATGTCAAAGGTCCTCGGCCTAATGATTCGTTTCTGATTGGTGCAAATAATGCTAGTGGAGGAAGCCCCGAAAATTCTTGTGGTCTGAGCGGGGAATGTGAGGAAGGAAGCAAGGGATTAGAGGCAGAGGAAGATGAACCAAGAAGTAAAAGAAGGAAAAATGAGAACCAATCCAATGAAGCAGCAGTATCAGAGGATGTTTTGGCAGAGCCGCGTGTTGTGGTGCAAAGTTCTACTGATTCTGAGATACTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGTTGGTGAAGGGCAATTCATATCCCAGAAGTTACTATAGATGTACAAATGTCAAGTGTAACGTTCGCAAGCACGTGGAGAGAGCAATAGATGATCCAAGAGCATTTGTCACTACATATGAGGGAAAGCACAACCATGAGATGCCAATCAAGAACACAGCAAGCGTGGCCTCTGAAAAAGATTCACAGGCTTCTCTTAGTAAAGACAAACCATGA 1413 0.448 MDIEKAERVVVAKPVASRPTCSTFRSFSELLAGAINDSPQLESSQAAVSAIRPKTVRFKPALNRTPAGFPSSEADIFGVAHSNSSDKSLTPDPKQSLIYKPMAKLVSKTTVSLLANMGNCSTRQQQPRQAMEASLQHFRNEKIRTNMSSNIHHQSVTPHADSTQTTETCKMVQQNIEEDQKVSASAMNGDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSLDGQIAEIVYKGEHNHPKPQPPKRNSAGTQVSGMVSDGMVQDVWSNNHSERNESNDGRIQNQNDTGLHSAYHVKGPRPNDSFLIGANNASGGSPENSCGLSGECEEGSKGLEAEEDEPRSKRRKNENQSNEAAVSEDVLAEPRVVVQSSTDSEILGDGFRWRKYGQKLVKGNSYPRSYYRCTNVKCNVRKHVERAIDDPRAFVTTYEGKHNHEMPIKNTASVASEKDSQASLSKDKP* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2681 470 MobiDBLite consensus disorder prediction 280 369 - -
Dod01g2681 470 Pfam WRKY DNA -binding domain 195 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g2681 470 Pfam WRKY DNA -binding domain 390 446 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g2681 470 MobiDBLite consensus disorder prediction 446 470 - -
Dod01g2681 470 PANTHER WRKY TRANSCRIPTION FACTOR 44 7 451 - -
Dod01g2681 470 Gene3D WRKY domain 177 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g2681 470 Gene3D WRKY domain 373 449 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g2681 470 MobiDBLite consensus disorder prediction 245 265 - -
Dod01g2681 470 MobiDBLite consensus disorder prediction 345 363 - -
Dod01g2681 470 MobiDBLite consensus disorder prediction 316 330 - -
Dod01g2681 470 ProSiteProfiles WRKY domain profile. 195 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g2681 470 SUPERFAMILY WRKY DNA-binding domain 382 448 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g2681 470 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 451 IPR044810 GO:0003700
Dod01g2681 470 SMART WRKY_cls 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g2681 470 SMART WRKY_cls 388 447 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g2681 470 ProSiteProfiles WRKY domain profile. 383 448 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g2681 470 SUPERFAMILY WRKY DNA-binding domain 191 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2681 Dod-Chr1 66254264 66262493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2681 92 449 WRKY Transcription Factor Family AT2G37260 45.503 1.05e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod01g2681 WRKY 7.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2681 - - gmx:100794069 717.227