Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2675 ATGGCTGTGGTTCAAGCCAATAGTTCATTGGAGGATCGAAGCCAACTCGAATCTGGACCCTTGAGTTCTGACTATATGGGTCCTCAAGGGACTTTTGTAGGTGTATATGATGGTCATGGTGGAGCTGAGGCCTCACAGTTTGTCAGTGATAATCTTTTCAGCAATTTCAAGAGTTCTGTAGCAGAACATCAAGGCATTTCAGAGAATGTTATCAAAAGGGCTTTTACTGCAACAGATGAGGATTTTCTGTCTCTTGTGAAGCAGCAATGGCTAAGCAAGCCACAAATTGCATCAGCGGGTTCATGTTGTCTGGCAGGGATAATTTGCAATGGCACGCTGTATATTGCAAATGCTGGAGACTCGAGGGTGGTGTTAGGAAGATTGGAGAGGGCAACAAGGGAGACATTTGCCATTCAATTATCTACAGAACACAATGTTAACATAGAGACAGAGAGAGATGAACTTCGGTCAAAGCACCCCTATGATTCACAAATCGTGGTCATGAAACACACAGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCGAGGTCCATGGGTGATGCATATCTGAAGAAAGCGGAATTCAACAGGGAGCCTCTACCATTAAAGTTCAGGTTGCCCGAACCCTTCTTCAAGCCGATTCTTAGTAGCGAGCCATCGATATCAACGCGCAAACTCCACCCTGATGACCAGTTTCTCATCTTTGCTTCTGATGGTTTGTGGGAGCAGCTCAGCAACCAAGAGGCTGTCAACATAGTCAGCCATAACCCACGTAATGGAATTGCTAGGAGGCTTGTGAAGGCTGCACTTCGACAAGCAGCCAAGAAGAGAGAAATGAGATTCTCAGACCTCCAAAAGATTGAGAAAGGGGTGAGGAGACACTTCCATGATGACATCACAGTGAATGTTGTGTTTCTGAATCCAAAACTGATTGATAATAGCTCCCTGTGGGGTGCTCCTATTTCAATCAAAGGAGGTTGCCCTGCCAATTCTTAG 996 0.4548 MAVVQANSSLEDRSQLESGPLSSDYMGPQGTFVGVYDGHGGAEASQFVSDNLFSNFKSSVAEHQGISENVIKRAFTATDEDFLSLVKQQWLSKPQIASAGSCCLAGIICNGTLYIANAGDSRVVLGRLERATRETFAIQLSTEHNVNIETERDELRSKHPYDSQIVVMKHTVWRVKGLIQVSRSMGDAYLKKAEFNREPLPLKFRLPEPFFKPILSSEPSISTRKLHPDDQFLIFASDGLWEQLSNQEAVNIVSHNPRNGIARRLVKAALRQAAKKREMRFSDLQKIEKGVRRHFHDDITVNVVFLNPKLIDNSSLWGAPISIKGGCPANS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2675 331 ProSiteProfiles PPM-type phosphatase domain profile. 1 306 IPR001932 -
Dod01g2675 331 MobiDBLite consensus disorder prediction 1 25 - -
Dod01g2675 331 SUPERFAMILY PP2C-like 26 307 IPR036457 -
Dod01g2675 331 CDD PP2Cc 1 306 IPR001932 -
Dod01g2675 331 PANTHER ALPHABET, ISOFORM E-RELATED 3 328 - -
Dod01g2675 331 Gene3D - 1 315 IPR036457 -
Dod01g2675 331 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 328 - -
Dod01g2675 331 SMART PP2C_4 7 304 IPR001932 -
Dod01g2675 331 ProSitePatterns PPM-type phosphatase domain signature. 32 40 IPR000222 GO:0043169
Dod01g2675 331 Pfam Protein phosphatase 2C 30 275 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2675 Dod-Chr1 66188926 66191813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2675 1 326 PP2C-type Phosphatase Gene Family AT3G12620 68.098 1.42e-165 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2675 K01102 - gmx:100791448 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2675 01 66188926 66191813 Dod01g2675 01 66188926 66191813 ECH
Dod01g2675 01 66188926 66191813 Dod07g0824 07 11762462 11766639 PCT