Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2669 ATGTCTCGCCCAACACCGCAACCACCCTTGCCCGACATGCTCCCTTTCTTCAACCAGTCCATGGAGCTCGTCCAACTTCCCATCCCTCGAAGAACCAGAAGCAGAACCAGTCTCTCTTCCACCCTTGGGGAGCTTCTAAAACGCGTAGAAGATGCTCAAAACGACACCGCCACCAACTCTCCTACTGCACCTGCACCACACCACCACAACCACCACCACCACCACCACCATGTTCTCGACCTTTCTCTTCCTTCTCCTCCTCCCAACACTTCTCACCCCTTTGTTCTCTCCTTCAACAACTTAACTTACAGTGTCAGGGTCCGTCGCAAGATGATGTCCCTCTCCCATTGCTTCTCCTCCAGAGACGCCGTTGAGCCCAAAACCGACGACAGCGGTGGCGGCACCACAAAGGTTCTTCTCAACCACATCTCCGGCGAGGCAAGGGACGGCGAGATCATGGCTGTCCTCGGCGCCAGCGGCTCAGGCAAGTCAACCCTGATTGACGCCCTCGCTGACCGAATCTCCAAGGAGAGCCTCAATGGCACCGTGACGCTAAACGGCGACGTTTTGGAATCACGCCTATTGAAGGGCATCTCCGCTTACGTCATGCAAGACGACCTCCTCTTCCCAATGCTCACCGTCGAGGAAACCCTCATGTTCTCCGCCGAGTTCAGGCTCCCTCGCTCCCTCTCCAGGTCCAAGAAGAAAGGACGCGTCCAAGCCCTAATCGACCAGCTCGGCCTCCGCAACGCCGCCTCAACCGTCATCGGCGACGAGGGCCACCGCGGCGTGTCCGGCGGTGAACGCCGCCGCGTCTCCATCGGGATCGACATCATCCACGACCCTATCATCCTCTTCCTCGACGAGCCAACCTCGGGACTGGACTCCACCAGCGCATTCATGGTGGTGAAAGTGCTGCAGCGAATCGCGCAGAGCGGGAGCATCGTGATCATGTCGATCCACCAACCAAGCTACCGAATCCTCGGCCTATTGGACCGGCTGATCTTCCTCTCCCACGGCCAGACGGTGTTCAGCGGCTCCCCGGCGAGCCTCCCACCGTTCTTCTCGGAGTTCGGCCATCCCATACCGGAAAACGAGAACCGCACGGAGTTCGCACTGGACCAAATCCGCGAGCTGGAAGAAGCTCCCGGCGGAACAAAAGGCTTGGTGGAGTTCAACAAACAATGGCAGTTAAAGAACAAAGAAAAACGCTCTTCCGATAAAGCCCTCAATGGAATCCCCAAAGTGTCCCTCAAGGACGCAATAAGCGCAAGCATCAGCAGGGGCAAGTTGGTCTCTGGCGCACCAACGGCCACCAACGGTAACAACCACAACAACGGCTCCAATAGTAACCAACTCGCAACGGCCTCGTCAGTCCCCACGTTCGCGAATCCGTTTTGGATCGAGATGGCGGTTATAGCGAAACGGTCTCTAACTAACTCATGGCGGATGCCCGAATTATTCGGGATCCGTTTGGGTGCTGTCCTCGTCACGGGCGCGATCCTCGCCACCATGTTCTCCCACCTTGACGACTCCCCCAAGGGTGTTCAAGAACGGTTAGGGTTCTTTGCTTTCGCCATGTCCACCACGTTCTACACGTGCGCCGAGGCCATTCCTGTGTTTATCCAAGAGCGCTACATCTTCATGAGGGAAACCGCCTACAACGCCTACCGCCGCTCCTCCTACGTGCTCGCGCACTCCATTATCTCAGTTCCTTCCTTGGTTTTCCTCTCCTTTGCGTTTGCCGCCACCACTTTCTGGGCGGTGGGGCTCGCCGGCGGTACTTCAGGGTTCGCTTTCTACTTCCTCACCATCGCGGCCTCGTTCTGGGCGGGAAGCTCGTTCGTGACATTCCTCTCCGGGGTGGTGTCGCACGTGATGCTTGGTTTCACTGTGGTGGTTGCGATCTTGGCGTATTTCTTGCTCTTCAGCGGGTTCTTCATCAGCAGGGACAGGATCCCTCCGTATTGGATATGGTTCCACTACATATCACTGGTGAAGTACCCTTTGGAGGGGGTGCTGCAGAACGAGTTTGACTTGAAGCCGCCGAGGTGCTTCGTGAGGGGGGTTCAGATGTTCGACAACACGCCGCTTGCGGCGGTGCCGGAGTTCCTGAAGGAGCAGCTGCTGAAGAGCATGAGCAGCACACTGGGGATGAACATCACATCCTCCACGTGCGTCATGAACGGGGCCGACGTGCTGAGGCAGCAGGGGATCACGCAGCTGAGCAAGTGGAACTGCTTATGGGTCACCGTCGCTTGCGGCTTCTTCTTTCGCTTCCTCTTCTATTTGACTCTCCTCTTCGGAAGCAAGAACAAGAGGAGGTAG 2328 0.5722 MSRPTPQPPLPDMLPFFNQSMELVQLPIPRRTRSRTSLSSTLGELLKRVEDAQNDTATNSPTAPAPHHHNHHHHHHHVLDLSLPSPPPNTSHPFVLSFNNLTYSVRVRRKMMSLSHCFSSRDAVEPKTDDSGGGTTKVLLNHISGEARDGEIMAVLGASGSGKSTLIDALADRISKESLNGTVTLNGDVLESRLLKGISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSRSKKKGRVQALIDQLGLRNAASTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRLIFLSHGQTVFSGSPASLPPFFSEFGHPIPENENRTEFALDQIRELEEAPGGTKGLVEFNKQWQLKNKEKRSSDKALNGIPKVSLKDAISASISRGKLVSGAPTATNGNNHNNGSNSNQLATASSVPTFANPFWIEMAVIAKRSLTNSWRMPELFGIRLGAVLVTGAILATMFSHLDDSPKGVQERLGFFAFAMSTTFYTCAEAIPVFIQERYIFMRETAYNAYRRSSYVLAHSIISVPSLVFLSFAFAATTFWAVGLAGGTSGFAFYFLTIAASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYISLVKYPLEGVLQNEFDLKPPRCFVRGVQMFDNTPLAAVPEFLKEQLLKSMSSTLGMNITSSTCVMNGADVLRQQGITQLSKWNCLWVTVACGFFFRFLFYLTLLFGSKNKRR* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2669 775 Pfam ABC transporter 140 292 IPR003439 GO:0005524
Dod01g2669 775 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 38 768 - -
Dod01g2669 775 Pfam ABC-2 type transporter 472 678 IPR013525 GO:0016020|GO:0140359
Dod01g2669 775 ProSitePatterns ABC transporters family signature. 264 278 IPR017871 GO:0005524
Dod01g2669 775 Gene3D - 131 353 IPR027417 -
Dod01g2669 775 MobiDBLite consensus disorder prediction 433 452 - -
Dod01g2669 775 MobiDBLite consensus disorder prediction 53 85 - -
Dod01g2669 775 SMART AAA_5 149 364 IPR003593 -
Dod01g2669 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 355 IPR027417 -
Dod01g2669 775 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 38 768 - -
Dod01g2669 775 Pfam ABC-2 type transporter 321 405 IPR043926 GO:0140359
Dod01g2669 775 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 118 364 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2669 Dod-Chr1 66140346 66143114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2669 139 324 Calmodulin-binding Proteins AT2G36910 29.630 5.87e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2669 K05681 - gmx:100803426 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2669 01 66140346 66143114 Dod01g2669 01 66140346 66143114 ECH