Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2668 ATGGGGAAAGGAGGCGAAGATTATGGGAGACAAGAGGAGAAAACGAGTTCCGGTGATTCTTCTTCGGAGCGCGAGACCTTCAAGGCGTGGGCGAAGGAGATTCGAGAATGCGAAGAACACTACAAGGTGAGCGTGAAAACTGGATTGAGCCACGACGAGGTCGAGAAACGGCAACGGATCTATGGGTTGAACGAGCTCGAGAAGCACGAGGGGCAATCAATCTGGAGCTTGATCCTTGAACAGTTCAACGACACGTTGGTTCGGATCCTCCTCGCCGCCGCGATAATCTCCTTCGTGCTCGCCTGGTTGGACGGCGACGAGGGCGGAGAGATGGAGATTACGGCCTTCGTCGAGCCTCTGGTGATTTTCCTGATCCTGATTGTGAACGCGGTCGTTGGTGTTTGGCAAGAGACTAATGCGGAGAAGGCTCTAGAAGCCTTGAAGGAGATCCAATCGGAGCACGCTTCTGTTATCAGAGACAAACAGAAAATCCCTAGCTTGCCAGCGAAGGATCTTGTTCCCGGTGACATCGTGGAGCTCAGGGTTGGGGATAAGGTCCCCGCTGATATGAGGGTTGTTGAATTGATTAGCTCTACTCTGAGGTTGGAGCAGGGATCGTTGACCGGTGAGAGTGAAGCTGTGAACAAGACTAATAAGCCTGTGGCTGAGGATTCTGATATTCAGGGCAAGAGATGCATGGTTTTCGCGGGGACGACGGTTGTTAACGGGAGTTGCATTTGTTTGGTTACTCAAACCGGCATGGATACCGAGATTGGGAAGGTGCATCAGCAGATACACGTCGCGTCCCAGAGCGAGGAAGATACACCCTTGAAGAAGAAGCTCAATGAGTTTGGTGAGACTCTGACTATGATAATTGGATTGATATGTGTTTTGGTTTGGCTCATCAATGTTAAGTACTTCCTTTCATGGGAGTATGTGGATGGGTGGCCAACGAACTTCAAGTTCTCGTTTGAGAAGTGTACTTATTACTTCGAGATTGCTGTGGCTTTGGCCGTGGCTGCGATTCCGGAGGGTTTGCCTGCTGTCATCACGACTTGCCTGGCATTGGGTACTCGCAAGATGGCCCAGAAGAATGCCCTCGTTCGGAAGCTACCTAGCGTGGAAACTCTGGGTTGCACAACTGTGATTTGTTCAGATAAGACCGGTACATTGACTACTAACCAGATGTCAGTGACAAAGCTAGTAGCTATTGGCCATAATGTAGACACACTGCGGGCCTTCAAAGTGGATGGAACTACCTACAATCCAGCTGATGGTAAAATAGATAACTGGCCTACGGGTCGATTGGATGCTAATCTTATAACGATTGCAAAAATATCTGCCATCTGTAATGATGCTGGAGTCACTCAGGCTGAGCATAAATTTGTCGCCATTGGAATGCCTACTGAAGCAGCGTTGAAAGTTTTGGTAGAGAAGATGGGCCTTCCTGAAGGAGCAAAGGGTGTACAATCTGCAAGTGCAAGCAGCGTGCTACGTTGTTGTGAATGGTGGGCTGAACGTGAACGACGGATTGCCACTCTTGAGTTTGACCGTGATAGAAAGTCAATGGGTGTTATTGTGGACTCTAGTGCAGGAAAAAAGTCGCTGCTTGTTAAGGGTGCCGTGGAAAATGTGTTGGAAAGAAGCTCTAAGATTCAATTGCGTGATGGTTCTGTTGTGAAACTGGATGACAATGCTAGGAACCTCGTATTGCAAGCTCTTCACGAAATGTCAACCAGTGCTCTGCGCTGTTTGGGATTTGCATACAAGGATGAGCTCCCTGAGTTTGAAAACTACAGTGGTAATGATGATCATCCAGCTCACCAGCTCTTGCTTAGTCCTGCCAACTATTCATCAATTGAAAGTGAACTTATTTTTGTTGGCTTGGTCGGGTTGAGGGATCCTCCTAGGGAAGAGGTATACCAGGCAATTGAAGATTGCAGAGCAGCTGGAATTCGTGTTATGGTTATTACTGGAGACAACAAGAACACTGCAGAAGCTATATGCCGTGAAATAGGTGTATTTGAATCCAATGAAGACATTAGTTTGAAAAGTTTAACTGGGAAAGATTTTATGGAATTGCGTGATAAAAAAACTCATCTGAGACAGAGTGGTGGGCTTTTGTTTTCAAGGGCGGAACCTAGGCACAAGCAAGAAATTGTGAGGCTGCTCAAAGAGGATGGAGAGGTGGTGGCCATGACTGGAGATGGTGTTAATGATGCACCTGCCTTGAAGCTTGCTGACATTGGTGTTGCAATGGGCATTGCAGGGACAGAGGTGGCAAAAGAAGCCTCAGATATGGTGTTGGCAGATGATAATTTTAGTACAATTGTTGCTGCTGTTGGTGAAGGTAGATCTATCTACAATAACATGAAGGCTTTTATCAGGTACATGATCTCTTCCAATATTGGTGAGGTTGCTTCTATATTTCTAACAGCTGCACTAGGTATTCCTGAAGGATTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTCACTGATGGACCCCCTGCAACAGCTTTGGGATTCAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCACTAATTAACATGTGGATCTTATTCCGCTACCTGGTTATTGGAACTTATGTTGGATTGGCTACAGTTGGTATATTCATCATATGGTATACACATGGTTCTTTCTTGGGTATTGATCTTAGCACGGATGGGCATACTCTTGTCACTTACTCCCAACTTTCCAACTGGGGTCAATGCTCCTCTTGGACCAACTTCACTGCCTCGCCCTTCACTGCTGGTGCCGGAGTTATCTCCTTTGATAGCCCTTGTGACTATTTCCAGACTGGTAAGGTGAAGGCTATGACTCTATCCCTCTCTGTGTTGGTAGCCATTGAAATGTTCAACTCCCTGAATGCTCTTTCTGAAGATGGAAGCCTGTTGACAATGCCCCCTTGGGTCAACCCATGGCTTCTTGTGGCAATGTCTTTATCTTTTGGTCTACACTTTCTGATCTTGTACGTGCCATTCTTAGCAAAAGTATTTGGCATCGTGCCACTGAGCTTCAATGAATGGCTTTTGGTTTTGGCTGTTGCATTTCCTGTCATTCTAATTGACGAGGTTCTGAAATTTGTGGGGAGGTGTACGAGTGGATCTCAAACATCTGGCACAAGAAGATCAAAGCAAAAATCAGAGTAG 3195 0.4664 MGKGGEDYGRQEEKTSSGDSSSERETFKAWAKEIRECEEHYKVSVKTGLSHDEVEKRQRIYGLNELEKHEGQSIWSLILEQFNDTLVRILLAAAIISFVLAWLDGDEGGEMEITAFVEPLVIFLILIVNAVVGVWQETNAEKALEALKEIQSEHASVIRDKQKIPSLPAKDLVPGDIVELRVGDKVPADMRVVELISSTLRLEQGSLTGESEAVNKTNKPVAEDSDIQGKRCMVFAGTTVVNGSCICLVTQTGMDTEIGKVHQQIHVASQSEEDTPLKKKLNEFGETLTMIIGLICVLVWLINVKYFLSWEYVDGWPTNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTKLVAIGHNVDTLRAFKVDGTTYNPADGKIDNWPTGRLDANLITIAKISAICNDAGVTQAEHKFVAIGMPTEAALKVLVEKMGLPEGAKGVQSASASSVLRCCEWWAERERRIATLEFDRDRKSMGVIVDSSAGKKSLLVKGAVENVLERSSKIQLRDGSVVKLDDNARNLVLQALHEMSTSALRCLGFAYKDELPEFENYSGNDDHPAHQLLLSPANYSSIESELIFVGLVGLRDPPREEVYQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFESNEDISLKSLTGKDFMELRDKKTHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINMWILFRYLVIGTYVGLATVGIFIIWYTHGSFLGIDLSTDGHTLVTYSQLSNWGQCSSWTNFTASPFTAGAGVISFDSPCDYFQTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLVAMSLSFGLHFLILYVPFLAKVFGIVPLSFNEWLLVLAVAFPVILIDEVLKFVGRCTSGSQTSGTRRSKQKSE* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2668 1064 ProSitePatterns E1-E2 ATPases phosphorylation site. 386 392 IPR018303 -
Dod01g2668 1064 Gene3D - 381 779 IPR023214 -
Dod01g2668 1064 SUPERFAMILY HAD-like 382 838 IPR036412 -
Dod01g2668 1064 MobiDBLite consensus disorder prediction 1 25 - -
Dod01g2668 1064 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 391 632 IPR023299 GO:0000166
Dod01g2668 1064 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 121 231 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g2668 1064 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 323 405 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g2668 1064 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 708 815 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g2668 1064 PRINTS P-type cation-transporting ATPase superfamily signature 758 770 - -
Dod01g2668 1064 PRINTS P-type cation-transporting ATPase superfamily signature 734 753 - -
Dod01g2668 1064 PRINTS P-type cation-transporting ATPase superfamily signature 384 398 - -
Dod01g2668 1064 PRINTS P-type cation-transporting ATPase superfamily signature 203 217 - -
Dod01g2668 1064 PRINTS P-type cation-transporting ATPase superfamily signature 628 639 - -
Dod01g2668 1064 PRINTS P-type cation-transporting ATPase superfamily signature 650 660 - -
Dod01g2668 1064 SUPERFAMILY Calcium ATPase, transduction domain A 153 263 IPR008250 -
Dod01g2668 1064 SFLD p-type atpase 365 786 IPR044492 -
Dod01g2668 1064 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 5 1061 - -
Dod01g2668 1064 SMART Cation_ATPase_N_a_2 28 102 IPR004014 -
Dod01g2668 1064 Pfam E1-E2 ATPase 150 364 - -
Dod01g2668 1064 Gene3D - 80 1046 - -
Dod01g2668 1064 Pfam haloacid dehalogenase-like hydrolase 381 748 - -
Dod01g2668 1064 SUPERFAMILY Calcium ATPase, transmembrane domain M 28 1047 IPR023298 -
Dod01g2668 1064 Pfam Cation transporting ATPase, C-terminus 819 1044 IPR006068 -
Dod01g2668 1064 Gene3D - 394 635 IPR023299 GO:0000166
Dod01g2668 1064 Gene3D - 47 268 - -
Dod01g2668 1064 Pfam Cation transporter/ATPase, N-terminus 30 97 IPR004014 -
Dod01g2668 1064 SFLD Haloacid Dehalogenase 365 786 - -
Dod01g2668 1064 PANTHER CALCIUM-TRANSPORTING ATPASE 5 1061 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2668 Dod-Chr1 66129282 66137648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2668 1 1064 Primary Pumps ATPases(2) AT1G07670 80.206 0.0 1747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2668 K01537 - gmx:100788807 1875.14