Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2657 ATGCAGAAGTACCGCTTCACCCGCTCCAACATTGCTCCCAGGAATCATCCTCAACCACCACCTCCTCCTCCAGGAAACAAGAAGGTTCACGGACACAGAAAACTCCAGAGTTTTCCCTCTGATTCTGTTTCTTGTGTTAGCGGAGTTGCAGATGAAGATTCGAACTCTTTTAAATTGGGGTGGAGATCTTCAAAACAGCTGTTTGGAACTCCCATTAAGGAGTTATTAGCTGAGGAGATGTCACGAGAGACTGAATCCAAAAGAAGAGGCCCCGGTGTTGTTGCCAGGTTGATGGGTATTGATGGGCTTCCATTGCAGCTGCCTGCAAATAAGCAACATAAGGGTTCTTCAGAAAACCATCTAACAAGGATGGCACAAGGAGGGAAAACACGAAGCAGTGGGACGTTATATGAGGGTCAATCGTCTAGGAGAAGCTCAAAGGATCAGCTAGAATTTAAGGATGTCTTTGAGGTCTCTGAGATCCCAAAGATGGAGAGCAGTAGGTATTCAATGCGGGGGTCAGTGGATTTGGAGATCACTGACGATGAAATGTCATTCATTGAACAGAACTTTGTCGACGCCAAATGCCGTGCAACTTATCAGGATTTACGGTCTTTGCAGGACTCTAATGATGATCTTATGCTAAAATATTTTAGGCGGCCTGATTCTTTGTCTAAAAAGCATCTAGATGATCTGCAAGCTGCTCCTCTCCAATCACCTTCTAGACACATACAAGGAATGAAATCATCAGATGCAGAGAATTATGAACATTTTGACTTCAGATGGAAGACAGATAGGGAGACGACAAGGTTGAATTGCAATAGATCTCACCAAAAGCATCAGGATGGTTATCCTTTCTATAGTCACAGGAGACATGCAATGCATAATTCACCAAAATCATCGAAGCTTCCATTTAAGGAAAGGCATGGACCTGATTCATTCCCCACAAGGATTGTTATCCTAAAGCCTAATCTGGGAAAAGTGCAGAATGCTACCAAAGATGTTTCGTCACCTTGTCCTTCACATGCTTTTCTGTCAGAGCGTGTAAAGCTCACTGAATTTCCAGACGTCAGATTTAGGGACATTGAACTGGATCAAAGGGAAAATATGCCTGATACTGCCTGGCATTCTAGGCAAAATTCTACGGAATCAAGAGAAATCGTCAAAGAAATCACTAGCCAAATGAAAAATAGTTTGAATAATGATTCCATGATCTTTTCATCTTCTAGATTTAGAGGATATGCTTGGGATGACAGCTTGTGTAGTTCTTCTGGGAATGAAGCTCCAGATGAGTCAGAGGTCAGAACTGTAACTTTTGGAAACTCATTTGACGTAAGCAATACTAGACGACCATCTCCCCGTTCTAGTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAATTGACAAACAAGTCTCAACAGGGCCAATCCATCTGCCAGAGCAGTACACTGGCTGAAATGCTTGCTATCCCTGATAAGGAAACAAAAGTATCAACTTTTGACAGCATGTCTTGCAGGGAAGGTTTCCATGATAAACTTGTTAGCAATGGTAAACCTGCTGGGTGGGTTGAACCATTGGGCATAAGCAGTAGGGATGGTTGGAAGAACGGTTGCATTGGAAGTTTACCAAGATCAAAGTCTCTTCCTTCTTCATCTACTGTCTTTGGAAGTGCCAGAACAATCTTGCACTGTGAAGCATTTCATGATGATCGATTTATGATGCCAAAGGATACGTTGAAATGGGAAAGGAAAAGAGCAGTTAAGCGTCTTGATCGGAGGCAATGTGTCAATATCAGAAGCTCAAGATCTGCTCGCAAGAAGTCTTGGTCTTCAAATTCCTCAAATACGGAAGGTGACGTGTCATCATCAGACTTAATTACAATTCAAAAAAAGGTGAACATCAATATTGACAAAGGTTCACCTGAGGAAGAAGTTTTGCCCACTGAATCATTAGCTGAGATCCTTGGAGATACTAGTGCAGTTGCTGGAAGTGTAGATGTTGCAAATAAAAATGCAGCTGGGTCATCTGAATCTTCTAATGAGGTGCTTCATGAATCATCTTCTCGTGTTTTGATTAGAAGTGACACTAATGCTGTTGACGGAGACAATTTAACGTCAGAGGAACTATCAGTTGGTTCATGCAGTAGAAGTTCAGTCTCATTTCAACCACCTGTAGCTGGACTTGAATCTTCATGTAGTAAAGATGCAGATCAACCCAGTCCAGTCTCAGTCCTAGAACCTTCCTTTACAGATGATCCTTGTTCTGAATGTTTTGAAAGTCTCAGTGTTGACCTACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAGGAATATGTGGAAGGAACCATGCAAACTTCAAGTGACGAAGATGGTGGGGAGGCATCTACTGGAATTCCAGAAAACAATGGATTATGCAGAACTGAAGATAGCTGGGAGTCTTCCTATGTGACTAATGTCTTGTCCGAGTCTGGCATTGATGAAGCTCAGCCTGATACATTTTTCGACGTTTGGCATTCTTTAGAATCCCCTGTTAGTCTCTCAGTGTTTGATGAACTTGAAAAGAGGTACTCAGATTGGGCTACTTGCTCAAGGTCCGAAAGGAGATTGCTTTTTGACCGTATAAATTCAGGAATTGCCAATATACACGAGCAATTCATGAATGCACTGCCATGGGTAATCCCTGCAACCCCAAAATTAGGTTCTAAATTGATGAAAAATGGGCTCCAGGACTATTTGTACAGGATGCTAGGGAACCAGGGAAAAGCAAAGGATACCGCACTGGGGAAGCTGTTGGTTTGTGAATCGCAGTGGTTGAACTTAAGAGATGACATTGATGTAATAGGTAGGGAAGTTGAAAGCTTGTTATTAGATGATCTACTGTCAGAGATAGCCAGTTTATAG 2931 0.4237 MQKYRFTRSNIAPRNHPQPPPPPPGNKKVHGHRKLQSFPSDSVSCVSGVADEDSNSFKLGWRSSKQLFGTPIKELLAEEMSRETESKRRGPGVVARLMGIDGLPLQLPANKQHKGSSENHLTRMAQGGKTRSSGTLYEGQSSRRSSKDQLEFKDVFEVSEIPKMESSRYSMRGSVDLEITDDEMSFIEQNFVDAKCRATYQDLRSLQDSNDDLMLKYFRRPDSLSKKHLDDLQAAPLQSPSRHIQGMKSSDAENYEHFDFRWKTDRETTRLNCNRSHQKHQDGYPFYSHRRHAMHNSPKSSKLPFKERHGPDSFPTRIVILKPNLGKVQNATKDVSSPCPSHAFLSERVKLTEFPDVRFRDIELDQRENMPDTAWHSRQNSTESREIVKEITSQMKNSLNNDSMIFSSSRFRGYAWDDSLCSSSGNEAPDESEVRTVTFGNSFDVSNTRRPSPRSSESSVSREAKKRLSERWKLTNKSQQGQSICQSSTLAEMLAIPDKETKVSTFDSMSCREGFHDKLVSNGKPAGWVEPLGISSRDGWKNGCIGSLPRSKSLPSSSTVFGSARTILHCEAFHDDRFMMPKDTLKWERKRAVKRLDRRQCVNIRSSRSARKKSWSSNSSNTEGDVSSSDLITIQKKVNINIDKGSPEEEVLPTESLAEILGDTSAVAGSVDVANKNAAGSSESSNEVLHESSSRVLIRSDTNAVDGDNLTSEELSVGSCSRSSVSFQPPVAGLESSCSKDADQPSPVSVLEPSFTDDPCSECFESLSVDLQGLRMQLQLLKLESEEYVEGTMQTSSDEDGGEASTGIPENNGLCRTEDSWESSYVTNVLSESGIDEAQPDTFFDVWHSLESPVSLSVFDELEKRYSDWATCSRSERRLLFDRINSGIANIHEQFMNALPWVIPATPKLGSKLMKNGLQDYLYRMLGNQGKAKDTALGKLLVCESQWLNLRDDIDVIGREVESLLLDDLLSEIASL* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2657 976 MobiDBLite consensus disorder prediction 422 475 - -
Dod01g2657 976 MobiDBLite consensus disorder prediction 459 473 - -
Dod01g2657 976 MobiDBLite consensus disorder prediction 1 47 - -
Dod01g2657 976 MobiDBLite consensus disorder prediction 106 148 - -
Dod01g2657 976 PANTHER AFADIN 26 974 - -
Dod01g2657 976 Pfam DUF761-associated sequence motif 84 104 IPR032795 -
Dod01g2657 976 MobiDBLite consensus disorder prediction 792 816 - -
Dod01g2657 976 MobiDBLite consensus disorder prediction 607 627 - -
Dod01g2657 976 MobiDBLite consensus disorder prediction 422 458 - -
Dod01g2657 976 PANTHER AFADIN 26 974 - -
Dod01g2657 976 Pfam Domain of unknown function (DUF4378) 823 972 IPR025486 -
Dod01g2657 976 MobiDBLite consensus disorder prediction 731 753 - -
Dod01g2657 976 MobiDBLite consensus disorder prediction 110 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2657 Dod-Chr1 66027815 66033353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2657 69 974 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.277 2.60e-128 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2657 - - pvu:PHAVU_001G171300g 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2657 01 66027815 66033353 Dod07g0798 07 11369343 11375453 PCT