Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2637 ATGACTTCGTTCTTGAAGCCTGAGAATGCCCTCAAAAGGGCGGAAGAATTGATCAACGTTGGGCAGAAGCAGGATGCTTTGCAGACGCTTCATGACCTCATTACTTCGAAAAGGTACAGGGCATGGCAGAAGACACTTGAAAGAATCATGTTCAAGTATGTGGAACTCTGCGTGGACATGCGCAAGGGGCGGTTCGCCAAGGACGGTCTCATTCAATACAGGATTATCTGCCAGCAAGTGAATGTTAGCTCACTTGAGGAGGTGATCAAGCATTTCATGCACCTCTCAACTGAGAAGGCTGAACAAGCACGTAGCCAGGCGCAGGCATTGGAAGAAGCCCTTGATGTCGATGATTTGGAGGCGGATAAGAGGCCAGAGGACTTGATGCTTAGCTATGTCAGCGGGGAGAAGGGCAAGGACAGATCTGATAGGGAGCTTGTTACCCCGTGGTTTAAGTTTCTGTGGGAAACATACCGGACTGTGCTTGAAATACTTAGGAACAACTCAAAGCTGGAAACTTTGTATGCTATGACAGCTCATCGAGCTTTCCAGTTTTGTAAGCAATATAAGCGAACAACAGAGTTCCGCAGACTTTGTGAAATCATAAGAAACCACTTGGCCAATCTTAATAAATACCGGGATCAACGTGACCGGCCTGATCTTTCAGCTCCTGAAAGCTTGCAACTGTATCTTGATACGAGATTTGAGCAGCTGAAGATTGCCACTGAACTTGAACTGTGGCAGGAAGCTTTTCGCTCTGTTGAAGATATACATGGACTAATGTGCATGGTCAAGAAGACACCCAAGGCATCCTTGATGGTTGTTTACTATGCTAAACTGACAGAAATATTTTGGATATCCTCAAGTCATCTATATCATGCATATGCATGGTTCAAGCTATTTTTATTACAAAAAAGCTTCAATAAGAATCTGAGTCAGAAGGATTTACAATTAATAGCTTCATCTGTCGTTCTTGCTGCACTCTCAGTGCCTCCTCATGATCGCACTCATGGTGCATCTCATTTGGAGCTGGAGCATGAAAAAGAGAGAAATTTGAGGATGGCTAATCTTATTGGCTTTAATCTCGAAACTAAACCTGAGAGCAGAGAAGTGCTCTCAAGGTCATCACTTCTAGCTGAACTGGCATCCAAGGGTGTGATGTCTTGTGTAACTCAGGAGGTGAAGGACATTTACAATACTTTGGAAAATGAATTCCTTCCCTCTGATCTTGCAGTAAAAGTGCAGCCCTTGTTGACTAAAATATCAAAGTTAGGGGGTAAACTTTCCACTGCTTCTTCTGTCCCAGAGGTGCAATTGTCTCAGTATGTTCCTGCACTGGAAAAGTTAGCTACCTTGAGGTTGCTACAGCAGGTGTCTAATGTGTACCAGACGATGAAGATTGAGACTTTATCCGGGATGATCCCCTTTTTTGATTTTTCTGTTGTGGAAAAGATTTCCGTTGATGCTGTTAAACAGAAGTTTGTATCGATGAAAGTTGACCACATGAGAAGTGTTGTAGTCTTTTGCAAAATGAGTCTTGAGTCTGATGGATTAAGGGATCACTTGGCAAACTTTGCTGAATGTTTGAATAAGGCAAGGCAGATGATTTATCCTCCAGATAAGAAACCTTCTAAAATTGGAGCGTTGCTCCCCACTTTGACAGAAGTTGTTGCCAAGGAACACAAGAGGCTACTTGCTCGAAAATCTATCATCGAGAAGAGGAAAGAAGAACAGGAACGACAGCTTCTTGAAATGGAACGTGAGGAAGAGTCAAAGAGGTTGAGACTGCAGAAAATAACTCAAGAAGCAGAACAAAGAAGACTTGCCACTGAATCTGAGGAGAGGCACAGACAGAGGATCCTCAGGGAAATAGAGGAACGACAAATGGAAGAAAATCAAGCATTGCTTCAGGAAGCTGAGAAGCGTATGAAGAAGAGAGGGGGGAAAAAGCCAATCCTTGAGGGGGATAAAATTACCAAGCAGACATTGATGGAGTTGACCTTGACTGAACAACTCCGAGAAAGACAAGAAATGGAAAAGAAACTGCAAAAATTAGCAAAAACCATGGATTATTTGGAAAGAGCAAAAAGAGAAGAAGCTGCTCCCCTTATTGAAGCTGCGTATAAAAAGCGCCAAGAGGAAGAGAAGATTCTTCATGAGCGTGAGCAACAGCAAGAGATTGAGTTGAGCAGACAGCGCCATGAAGGAGATCTTAAGGAGAAAGAGAGGCTTGTTCGAATGATTGGCAATAAAGAGATATATCAAGAGAAAGTTGTCACTCGTCGGCAAGCAGAATTTGACAGATTGAGGAAGGAAAGGGAGGAGCGAATCTCTAGGATTTTACAGTCCAGGAGACAGGAGAGGGAAAGGATGAGGAAGTTGAAGTATTATCTGAAGGTAGAAGAAGAGAGGCAGCAGAAGTTGCATGAAGAGGAAGAGGCTCGGAAACATGAAGAGGCTGAGAGGCGAAAGAAGGAAGAGGCAGAACGCCTGGCAAAGTTGGCTGAGATAGCTGAAAAACAGAGGCAAAGAGAGCGGGAACTCGAAGAAAAGGAAAAACAAAGGAGAGAAGCATTGTTGGGCAGAGGTACTGAACCTGCTTCCAGGCCTTCTGAGCCGCCTACCCGCCCACCGGAACCTGGATCTGCTGCTCCTGCTGCTGGCAGCTGCAGCTGCAGCGGCTGCAGGGCCTGCCCCAGGGAAGTATGTCCCTAG 2715 0.4471 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLETLYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCMVKKTPKASLMVVYYAKLTEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKPESREVLSRSSLLAELASKGVMSCVTQEVKDIYNTLENEFLPSDLAVKVQPLLTKISKLGGKLSTASSVPEVQLSQYVPALEKLATLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMRSVVVFCKMSLESDGLRDHLANFAECLNKARQMIYPPDKKPSKIGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITQEAEQRRLATESEERHRQRILREIEERQMEENQALLQEAEKRMKKRGGKKPILEGDKITKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYKKRQEEEKILHEREQQQEIELSRQRHEGDLKEKERLVRMIGNKEIYQEKVVTRRQAEFDRLRKEREERISRILQSRRQERERMRKLKYYLKVEEERQQKLHEEEEARKHEEAERRKKEEAERLAKLAEIAEKQRQRERELEEKEKQRREALLGRGTEPASRPSEPPTRPPEPGSAAPAAGSCSCSGCRACPREVCP* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2637 904 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 887 IPR027512 GO:0005852
Dod01g2637 904 Gene3D - 352 510 - -
Dod01g2637 904 Gene3D - 268 342 - -
Dod01g2637 904 Coils Coil 704 724 - -
Dod01g2637 904 Coils Coil 668 698 - -
Dod01g2637 904 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Dod01g2637 904 Pfam PCI domain 373 508 IPR000717 -
Dod01g2637 904 SMART PINT_4 441 532 IPR000717 -
Dod01g2637 904 Coils Coil 622 642 - -
Dod01g2637 904 Coils Coil 800 858 - -
Dod01g2637 904 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 894 - -
Dod01g2637 904 Coils Coil 561 602 - -
Dod01g2637 904 Gene3D UVR domain 217 267 - -
Dod01g2637 904 Coils Coil 93 120 - -
Dod01g2637 904 MobiDBLite consensus disorder prediction 803 862 - -
Dod01g2637 904 MobiDBLite consensus disorder prediction 803 894 - -
Dod01g2637 904 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 894 IPR027512 GO:0005852
Dod01g2637 904 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2637 1 877 Eukaryotic Initiation Factors Gene Family AT4G11420 76.879 0.0 1296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2637 K03254 - gmx:100782598 1390.94