Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2633 ATGGCGGCACAGCGTCGGCTTCGGGAGCTTCAATCCCAAGCGGCGAACAAGATCTGCGTCGACTGCTCCCAGAAGAACCCCCAGTGGGCCTCCGTCTCCTACGGTGTCTTCATGTGCCTCGAGTGCTCCGGCAAGCACCGCGGCCTCGGCGTCCACATCTCCTTCGTCCGATCCGTCACCATGGACTCCTGGTCCGACATCCAGATCAAGAAGATGGAGTCCGGCGGCAACGACGCCCTCAACTCCTTCCTCTCTCGCTATGGTATCCCTAAAGAAACAGACATCGTCACCAAATACAACACCAACGCCGCCAAAATCTATCGCGATCGCATCCAGGCCCTCGCAGAGGGCCGCCCCTGGCGCGATCCGCCGGTTGTTAAGGAGAATCTCCGCTCCTCCAAGGGGAAACCGCCGTTGGCTCATAACGGTCACGGTAACGGTAACGGTGACGGTGGTGGGTGGGATAGTTGGGATAATGATGATGGATTTGGTGCATCTCGTAATGATATGAGGAGGAATCAGTCTACCGGCGATGTGAGAGGGTTTCGGGGCGGCGGAGGAGCTGCCGGTGGTGGAGTTCCAGCGAGGTCGAAGTCGACGGAGGATATATACACGCGGTCGCAGCTGGAGGCTTCTGCGGCTAATAAGGAGAGCTTTTTTGCTCAGAAGATGGCGGAGAATGAGTCGAGGCCCGAGGGGCTTCCGCCGTCGCAGGGAGGGAAGTACGTTGGGTTTGGATCTGGCCCCGCCCCTGCGCCGAGGGGTAACCCTCAAAACGACTATTTCTCCGTCGTTTCGCAGGGGATTGGTAAATTATCTCTGGTTGCTGCAACTGCTGCTCAGTCTGCTGCTACTGTTGTTCAGGCTGGCACCAAGGAGATCAGTGCTAAGGTAAAGGATGGTGGTTATGATTACAAGGTCAATGAAACTGTCAATGTTGTCACTCAGAAGACATCTGAGATTGGACAAAGGACATGGGGCATAATGAAAGGGGTCATGGCAATGGCTTCACAGAAGGTTGAGGAGTTCACTAGAGAGAACCCAAATTGGAAGGCTGATAACTGGCAAAGAAATGAAAATGATAGAAATGGTTTCTATCAGGAGTACAATCAAGAGAATAAAGGTTGGAATTCTTCTACCACAGGAGGACAACCATCATCAGGTGGACAGGCTAATAACTCAAGTTCTTGGGACGATTGGGACCAGCAAGATCCTAGGAAGCAAGAACCAGCTAAAGGATCTGCTCATCAGTCAGCAGGTGGGCACTTTGGTACTCACAACTCAAGCTCTTGGGATGATTGGGACCACAAAGATGCTACTAGGAAGGAAGAACCAGCAAAAGGAAGAGCTCCTCATAGCAGTGATGGTTGGGCTGGCTGGGATGATGCCAAAGATGATGGATATGATAATTTCTATGGGAGTGCATCTTCTAATAATAAAGCTGCTGGTCATAATGGGAAGTCAGATGCAGCTTGGACAGGAGGCGGCTTTCTCTGA 1497 0.5264 MAAQRRLRELQSQAANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSDIQIKKMESGGNDALNSFLSRYGIPKETDIVTKYNTNAAKIYRDRIQALAEGRPWRDPPVVKENLRSSKGKPPLAHNGHGNGNGDGGGWDSWDNDDGFGASRNDMRRNQSTGDVRGFRGGGGAAGGGVPARSKSTEDIYTRSQLEASAANKESFFAQKMAENESRPEGLPPSQGGKYVGFGSGPAPAPRGNPQNDYFSVVSQGIGKLSLVAATAAQSAATVVQAGTKEISAKVKDGGYDYKVNETVNVVTQKTSEIGQRTWGIMKGVMAMASQKVEEFTRENPNWKADNWQRNENDRNGFYQEYNQENKGWNSSTTGGQPSSGGQANNSSSWDDWDQQDPRKQEPAKGSAHQSAGGHFGTHNSSSWDDWDHKDATRKEEPAKGRAPHSSDGWAGWDDAKDDGYDNFYGSASSNNKAAGHNGKSDAAWTGGGFL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2633 498 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Dod01g2633 498 MobiDBLite consensus disorder prediction 372 399 - -
Dod01g2633 498 CDD ArfGap_ArfGap1 3 117 - -
Dod01g2633 498 MobiDBLite consensus disorder prediction 225 258 - -
Dod01g2633 498 MobiDBLite consensus disorder prediction 429 450 - -
Dod01g2633 498 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 418 - -
Dod01g2633 498 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 416 498 - -
Dod01g2633 498 MobiDBLite consensus disorder prediction 372 498 - -
Dod01g2633 498 Gene3D Arf GTPase activating protein 1 129 IPR038508 -
Dod01g2633 498 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 418 IPR044519 GO:0005096|GO:0016192
Dod01g2633 498 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 416 498 IPR044519 GO:0005096|GO:0016192
Dod01g2633 498 Pfam Putative GTPase activating protein for Arf 5 100 IPR001164 GO:0005096
Dod01g2633 498 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Dod01g2633 498 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Dod01g2633 498 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Dod01g2633 498 MobiDBLite consensus disorder prediction 118 201 - -
Dod01g2633 498 SUPERFAMILY ArfGap/RecO-like zinc finger 4 114 IPR037278 -
Dod01g2633 498 SMART arf_gap_3 4 120 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2633 Dod-Chr1 65725600 65729759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2633 4 138 C2H2 Transcription Factor Family AT4G21160 40.146 1.13e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2633 K12492 - gmx:100778302 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2633 01 65725600 65729759 Dod01g2633 01 65725600 65729759 ECH