Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2616 ATGAATATTGAGAAAGTCATGGAACCTCGTCAATTAACTGCACTTGTTGTTGATGATGACATGATGGTCCGAATGATTCATCGCAAGATTTTGGACAGTGTTGGAGTAAAAAATCAAGTCGTGCAAAATGGCAAAGAAGCCGTAGACCTTCACCGCTCTGGGCAAAGCTTTGACCTGATTCTCATGGACATGGACATGCCTATCATGAATGGCATTGAGGCAACAAAGGAACTTCGGTCAATGGGGATTCATAGCATGATTGCTGGTGTGTCAGCACGCTCAGTCGAATCGCATATACGAGAATTTGTGGAAGCAGGATTAGATTGCTACCTAGAGAAGCCCTTGAACGTTGCTAAGCTTACACCAATCATTCACAAATCACAAGATCTTCTACAAACTATAATTTAG 408 0.4216 MNIEKVMEPRQLTALVVDDDMMVRMIHRKILDSVGVKNQVVQNGKEAVDLHRSGQSFDLILMDMDMPIMNGIEATKELRSMGIHSMIAGVSARSVESHIREFVEAGLDCYLEKPLNVAKLTPIIHKSQDLLQTII* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2616 135 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Dod01g2616 135 SMART REC_2 12 124 IPR001789 GO:0000160
Dod01g2616 135 CDD REC_hyHK_CKI1_RcsC-like 15 124 - -
Dod01g2616 135 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 8 129 - -
Dod01g2616 135 Pfam Response regulator receiver domain 15 123 IPR001789 GO:0000160
Dod01g2616 135 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 129 - -
Dod01g2616 135 SUPERFAMILY CheY-like 10 129 IPR011006 -
Dod01g2616 135 Gene3D - 2 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2616 Dod-Chr1 65427851 65428650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2616 12 124 Response Regulator Gene Family AT3G04280 48.696 6.17e-30 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod01g2616 Response_reg 4.6e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2616 - - gmx:100819813 164.851