Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2615 ATGGAAGCTCAAGACCAAATGACAACTCGAAATTCAGCCACCCAACTAAGAGCACTTGTTGTAGATGACAATATACTCAACCGAAAGATTCATCAAAAGCTATTGAAAAGCGTTGGAGTGGAATGTCTTGGAGTAGGAAATGGCAAAGAAGCAGTAGACATTCATTGCAATGGACAAAGCTTTGACCTAATTCTCATGGACATGGATATGCCTGTCATGAATGGCATTGAGGCAACAAAGACACTTCGTTCAATGGGCATTTGCAGCATGATTGTTGGTGTGTCCTCACGCTGTATGGAAGCAGAAATACGGGAATTTGTGGAAGCGGGGCTTGATGAGTACCAAGAGAAACCCTTGACAAATGCTAAGCTTTGTTCAATTCTTGATAAGATCAACCGCAAATGA 405 0.4198 MEAQDQMTTRNSATQLRALVVDDNILNRKIHQKLLKSVGVECLGVGNGKEAVDIHCNGQSFDLILMDMDMPVMNGIEATKTLRSMGICSMIVGVSSRCMEAEIREFVEAGLDEYQEKPLTNAKLCSILDKINRK* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2615 134 SMART REC_2 16 128 IPR001789 GO:0000160
Dod01g2615 134 Gene3D - 1 134 - -
Dod01g2615 134 ProSiteProfiles Response regulatory domain profile. 17 132 IPR001789 GO:0000160
Dod01g2615 134 CDD REC_hyHK_CKI1_RcsC-like 19 128 - -
Dod01g2615 134 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 133 - -
Dod01g2615 134 SUPERFAMILY CheY-like 15 131 IPR011006 -
Dod01g2615 134 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 3 133 - -
Dod01g2615 134 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2615 Dod-Chr1 65422967 65423588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2615 16 128 Response Regulator Gene Family AT3G04280 46.957 4.79e-30 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod01g2615 Response_reg 7.6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2615 - - adu:107491646 200.675