Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2606 ATGGTTGCTGCCGCCAATCCTATAGTTGGGTCCCATGTTTGGGTGGAGGATTCTGATGTAGCTTGGATAGATGGCGAAGTCTTGGAGGTTAACGGAGAAGAAATCAAAGTTCTTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGCTTCCAGTATTTATCATAAAGATACCGAAGTCCCACCAAGTGGAGTAGATGATATGACAAAGCTTGCATATCTACACGAACCTGGAGTGCTAGAAAATCTTAGATCAAGATATGATATAAATGAAATTTATACTTACACTGGAAATATATTGATTGCCGTGAATCCTTTCATAAAACTGCCTCATTTATATGATAATCATATGATGGCACAATATAAAGGAGCAGCTTTTGGTGAGTTAAGTCCACATCCCTTCGCTGTTGCAGATGCTGCATATAGGCTCATGATAAATGAGGGAATCAGCCAGTCAATATTGGTTAGTGGGGAGAGTGGGGCTGGTAAAACAGAAAGTACTAAGTTACTCATGCGGTATCTTGCCTACATGGGAGGGAGAGCTGCTACTGCTGAAGGTAGAACTGTTGAGGAAAAAGTCCTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGCAATGCAAAGACTGTCAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATACAATTTGATCAGAGGGGAAGAATTTCAGGAGCTGCTATCAGAACTTATCTGCTGGAAAGATCCCGTGTTTGTCAGGTGTCAGATCCAGAGAGGAATTATCACTGTTTCTACATGCTCTGTGCTGGACTGCATGAGGAAGTTAAGAAGTACAAGTTAGGAAACCCAAAAATATTTCATTATCTGAATCAATCAAATTGCTATGAGTTGGAAGGGGTTGATGAATCTAAAGAATATCTTGCTACAAGGAGAGCAATGGATGTTGTTGGAATAAGTTCTGAGGAGCAGGATGCAATCTTTCGAGTTGTTGCTGCAATTTTGCATCTCGGCAACATTGAGTTTGCCAAAGGGAAGGAGATAGATTCATCTATGCCAAAAGATGAAAAATCTCGGTTCCATCTACAGACTGCAGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTCTGCAAACGAGTAATTGTTACTCGGGACGAAACAATTACAAAATGGCTGGATCCAGAAGCTGCTGCACTCAGCCGAGATGCTTTGGCAAAGATTGTGTACACGAGGTTATTTGACTGGTTGGTTAATAAAATTAATAATTCCATTGGGCAAGATCCTGAGTCAAAATCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATATTCTGGATCTCATTGAAAAGAAACCCGGTGGCATTATTGCTCTTCTGGATGAAGCTTGCATGTTTCCTAGATCAACACATGTAACTTTTGCCCAAAAGCTGTATCAGACCTTCAAAAACCATAAAAGGTTTAGCAAGCCCAAATTAGCACGTAGTGACTTCACAATTTGCCATTATGCGGGTGATGTCACTTATCAAACTGAATTTTTCCTCGACAAGAACAAAGATTATGTTGTAGCTGAACACCAGGCTCTTCTTTATGCTTCTAAATGCCCCTTTGTGTCGGATTTGTTTCCCCCATCTCTTGAGGAATCCTCCAAACAATCAAAGTTCTCTTCAATAGGTTCCCGATTCAAGCAACAATTGCAATCCTTGCTTGAAACTCTCAGTGCTACTGAGCCACACTACATTCGTTGTGTAAAACCTAATAATCTTCTCAGGCCAGCAATTTTTGAGAATAAAAATGTTTTGCTGCAACTGCGTTGTGGGGGAGTTATGGAGGCAATAAGGATAAGTTGTGCTGGGTATCCCACTCGAAAATCCTTTGATGAATTTGTGGATCGATTTTGCCTTTTGGCACCTGATGCTTTGGATGGAAGTGTTCATGAGATCAGGGCTTGCAAGAGGATCCTGGAGAATGTTGGACTTGAAGGCTATCAGATTGGTAAAACAAAGGTGTTTCTTCGAGCTGGTCAAATGGCAGAGCTAGATACCCGTAGAAGTGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAGTACGTTCATTTTTGGCCTGCCGAAGTTTTGTCTCGCTGCGTTTGTCTGCTGTGCTGATTCAAGCTGCATGCAGGGGACAACTTTCTCGGCAAGTTTATGAGGGAATGCGGCAGGAGGCTTCTAGTTTGATGATTCAGAGATATTTCCGCATGCATGTTGCTAAGAAGGCATACAAAGAATTGTATATCTCTGCTGTCTGGATTCAGACTGGTATGCGGGGGATGGCTGCTTGCTGTGAGCTATGGTTTAGAAGGCGGACTAGAGCAGCAATTGTCATTCAGAGCCACTGCCGGAAGTACTTGGCCCGACTTCATTTTACGAAATTAAAGAAGGCAGCACTTACAACACAATGTGCATGGAGAGGAAAAGTTGCTCGGCGAGAACTACGGAAACTCAAGATGGTTGACATGGAAGAAGCGAAAACACGAGAAAATGAAAAATTACAGTCTGCTTTGCAAGATATGCAACTTCAGTTTAAAGAAACTAAAGTTCTTCTTGAAAAGGAGCGGGAGGCTACAAAAGGAGCAATGGAGAGAGAGCCTGTCATACAGGAGGTTCCAGTTGTTGACCATTCTTTGATGAAGAAGCGTAGTACTGAAAATGAGAAATCCAAGAGAATTGATGAAACAGAAAAAAGGTATGAAGAGGCAAACAGAATTGGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCAGAATCGAAAGTAATCCAATTGAAGATTGCTATGCAAAGGCTTGAAGAGAAATTATCAGACATGGAATCTGCGGACTATAGTCATCAACAAGAATCTCGGCTTAACTCTAACTCATCTGTGGAAACAATAGCAGAACACATCTCAACCCATGTATATGAGGAGAATGTCGATGCACTTGTCAACTGTGTTATGAAAAATATTGGCTTCAATAATGGAAAGCCCTTTGCTGCATTTACCATCTACAAATGCCTTCTGCACTGGAAATCATTTGAAGCTGAAAGAACTAGTGTATTTGATCGCCTGATCCAGATGATTGGTTCTGCAATTGAGTTAACTAGATGTCTTAATCCTGAAAGCCTGAAATTTGGTGGTGTAGCAGCTGCAACCCCATTTAAAAAACCACCTGATCCAACATCCCTCTTTGGAAGAATGACTAGGAGCTTTCTTTCATCCCCTTCTTATGCCAACCTTGCTGCCCCTGCGTCGGAGGTTGTATGCAAGGTAGAGGCTAAATACCCTGCTTTGTTTTTCAAGCAGCAGCTCGGAGCCTATTTGGAGAAAATATATGGCACCATTCGGGACAACTTGAAGGAGTTGAAATCATTGCTTGCATTATGTATCCAGGCACCAAGTACATCAAAAGGAACATCGCGATCTGGCCGATCCTCTGGTAAAGATTCTCCCATGGTTCACTGGCAGAGCATTATTGAATCCCTCAACAACCTCCTCTGTACCCTGAAAGAGAACTTTTATGCTGGGTCTTCTTGGGATGAACTCAAGCACATAAGACACGCTGTTGGTTATTGGTTATTCATCAGAAGTATAGGATCTCCTATGATGAAATCATTAATGATTTATTCCCTATCCTTAGTGTCCAGCAGCTGTATAGAATGA 3825 0.4128 MVAAANPIVGSHVWVEDSDVAWIDGEVLEVNGEEIKVLCTSGKTVVVKASSIYHKDTEVPPSGVDDMTKLAYLHEPGVLENLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDNHMMAQYKGAAFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAATAEGRTVEEKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAGLHEEVKKYKLGNPKIFHYLNQSNCYELEGVDESKEYLATRRAMDVVGISSEEQDAIFRVVAAILHLGNIEFAKGKEIDSSMPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVNKINNSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHVTFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTEFFLDKNKDYVVAEHQALLYASKCPFVSDLFPPSLEESSKQSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPNNLLRPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKSFDEFVDRFCLLAPDALDGSVHEIRACKRILENVGLEGYQIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKVRSFLACRSFVSLRLSAVLIQAACRGQLSRQVYEGMRQEASSLMIQRYFRMHVAKKAYKELYISAVWIQTGMRGMAACCELWFRRRTRAAIVIQSHCRKYLARLHFTKLKKAALTTQCAWRGKVARRELRKLKMVDMEEAKTRENEKLQSALQDMQLQFKETKVLLEKEREATKGAMEREPVIQEVPVVDHSLMKKRSTENEKSKRIDETEKRYEEANRIGEERLKQALDAESKVIQLKIAMQRLEEKLSDMESADYSHQQESRLNSNSSVETIAEHISTHVYEENVDALVNCVMKNIGFNNGKPFAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIELTRCLNPESLKFGGVAAATPFKKPPDPTSLFGRMTRSFLSSPSYANLAAPASEVVCKVEAKYPALFFKQQLGAYLEKIYGTIRDNLKELKSLLALCIQAPSTSKGTSRSGRSSGKDSPMVHWQSIIESLNNLLCTLKENFYAGSSWDELKHIRHAVGYWLFIRSIGSPMMKSLMIYSLSLVSSSCIE* 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2606 1274 Pfam Myosin head (motor domain) 64 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g2606 1274 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dod01g2606 1274 SMART MYSc_2a 56 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g2606 1274 SMART iq_5 758 780 IPR000048 GO:0005515
Dod01g2606 1274 SMART iq_5 783 805 IPR000048 GO:0005515
Dod01g2606 1274 SMART iq_5 831 853 IPR000048 GO:0005515
Dod01g2606 1274 SMART iq_5 854 876 IPR000048 GO:0005515
Dod01g2606 1274 SMART iq_5 735 757 IPR000048 GO:0005515
Dod01g2606 1274 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Dod01g2606 1274 PANTHER MYOSIN-14 7 912 - -
Dod01g2606 1274 PANTHER MYOSIN 7 912 - -
Dod01g2606 1274 PANTHER MYOSIN 950 1002 - -
Dod01g2606 1274 Gene3D - 736 785 - -
Dod01g2606 1274 Gene3D - 786 833 - -
Dod01g2606 1274 Gene3D - 834 882 - -
Dod01g2606 1274 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g2606 1274 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g2606 1274 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g2606 1274 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g2606 1274 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g2606 1274 PANTHER MYOSIN-14 1026 1227 - -
Dod01g2606 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 788 880 IPR027417 -
Dod01g2606 1274 Gene3D - 253 311 - -
Dod01g2606 1274 Gene3D - 667 734 - -
Dod01g2606 1274 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Dod01g2606 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 786 IPR027417 -
Dod01g2606 1274 Pfam IQ calmodulin-binding motif 833 852 IPR000048 GO:0005515
Dod01g2606 1274 Pfam IQ calmodulin-binding motif 762 779 IPR000048 GO:0005515
Dod01g2606 1274 Pfam IQ calmodulin-binding motif 857 876 IPR000048 GO:0005515
Dod01g2606 1274 Pfam IQ calmodulin-binding motif 787 805 IPR000048 GO:0005515
Dod01g2606 1274 ProSiteProfiles IQ motif profile. 832 861 IPR000048 GO:0005515
Dod01g2606 1274 Coils Coil 946 966 - -
Dod01g2606 1274 Gene3D Myosin VI head, motor domain, U50 subdomain 313 602 - -
Dod01g2606 1274 PANTHER MYOSIN 1026 1227 - -
Dod01g2606 1274 Pfam Myosin N-terminal SH3-like domain 9 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dod01g2606 1274 ProSiteProfiles Myosin motor domain profile. 62 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod01g2606 1274 Coils Coil 974 1001 - -
Dod01g2606 1274 ProSiteProfiles IQ motif profile. 784 808 IPR000048 GO:0005515
Dod01g2606 1274 Coils Coil 880 918 - -
Dod01g2606 1274 Gene3D Kinesin motor domain 65 663 IPR036961 -
Dod01g2606 1274 CDD MYSc_Myo11 76 721 IPR036018 -
Dod01g2606 1274 PANTHER MYOSIN-14 950 1002 - -
Dod01g2606 1274 Gene3D - 440 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2606 Dod-Chr1 65271921 65305667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2606 1 1227 Myosins gene family AT1G04160 68.992 0.0 1838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2606 K10357 - gmx:100819463 2049.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2606 01 65271921 65305667 Dod06g1647 06 22355717 22375650 PCT
Dod07g0756 07 10609951 10630338 Dod01g2606 01 65271921 65305667 PCT