Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2602 ATGCTCTTCCTTCCGGCTCCTCCTGCTGCCGCGCTGGCCATGTTTGCCGGCGGATGTCTCGCCGGAATTCTGCGCCTGTTCCTTTCTCCTGACGATGCTCCTTGCTCCCGGTTTCGGGCTTGGCGAGAGAGAATGCCGGCCTCGCTTTTGTTTCTCATCGCTCTTCTTAACTTGCTCTTCTCTTGCTCAGTGAAGTCGGTTTCTGTGAGTGTGTCATTTGCTTCATCAGAACGAGCTAAAACGTGGTTAGTTAGACCTTCTTCTGGACCGTCTTCTGCACCTGCACCTGTGCCATCTCCATCTCCATCTTATCATGGTCCTATTGTGACTCCAAGTCGAAAACATCGCTACCATCGCCATCACCATCATAGCATGAGACCTTATCCAGTGGCTCCACCTCCTTCTAAAGACCAAGGTTGTGACCAAATCTGTGCGGATCCACTAACACCAACTCCCTTCGGTTCACCCTGTGGTTGTGTATTTCCCATGAAAGTCAGGCTTTCACTGGGTGTGTCTCCTTATGCTGTTTTTCCAGTAATGAATGAACTAGAGATTGAAGTTGCCTTAGGCATATACTTAGAGCAGAGTCAGGTGAAGATAATGGGTGCCAGTGCTGATAGTCAAAATCAGGGAAGAACAGTAGTTGATATTAACTTGGTTCCATTGGGAGAGAAATTTGATAATACCACTGCAGCGTTGACATATGAGAGGTTCTGGCACAAGAAAGTCCCGCTAAATAGAAGCCTTTTTGGTGATTATGCTGTTGTGTACATTACCTATCCTGGAATTTCATCATCGCCACCATATCCATATGGAACTATAACAGGGGGCGCTCCAATGGAAAGTGTTGGCGGTAATCTGCCATTCTCTGCCAACCTTGTCAACAAGAATCAGAAAATGAATCTAAGAACCATAATTATCATTGCTTCATCGTCCTTTGTTCTCTTGCTGGTTTTGGTTGGAGCATTCTCTATCATTTTGAAATGTAAGAAGAATAGGAGACCTTCGAGTGCTGTTGGCCTTGCGTTCACATCGTCTCTAAACAAGAGATCTGGCTTGGGGTCTATGTTGTCAAGCAGTATTACAAGCTCGACATCAGTGTCCCTTATGTCTACAATGGCTGCTTCCATTCTCTCTGTTAAAACATTTTCACTTCCTGAGCTTGAGAAAGCAACGGATAAGTTTAGTTCAAAGAGAGTGTTGGGAGAAGGAGGATTTGGGCGTGTTTACAGTGGGACATTTGAAGATGGGACTGAAGTTGCAGTTAAGCTTCTAACAAGAGATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAAATGCTCAGCCGTTTGCATCACCGTAATCTTGTGAAACTGCTTGGCATATGTATAGAAGGGCGCAGGCGTTGCTTGGTGTATGAGCTTGTCCGCAATGGCAGCGTTGAGTCCCATTTGCATGGTGTTGACAAAATAAAGGGACTTCTAGATTGGGAAGCACGGTTGAAAATTGCCCTTGGAGCTGCAAGAGGTTTGGCCTACCTTCATGAGGATTCTAATCCTCGTGTAATTCATCGAGACTTCAAAGCTAGCAATGTGTTATTAGAAGATGACTTTACACCAAAGGTTTCTGATTTTGGGTTGGCAAGAGAAGCAACTGAAGGAAGTCAGCATATTTCTACCCGGGTGATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCGATGACAGGTCATTTACTCGTTAAAAGTGATGTTTATAGCTATGGTGTCGTGCTGCTTGAACTTCTCACAGGCAGAAAACCAGTGGACATGTCTCAACCTCAGGGACAAGAGAATCTAGTAACTTGGGCAAGGCCCCTGTTGGCGAGTAGAGAAGGTTTAGAACAGCTAGTGGACCCCTCTTTGGCAGGAAATTATGACTTCAATGACATGGCAAAGGTTGCTGCCATTGCTTCAATGTGTGTTCACCCGGAGGTCACTCAGAGACCTTTCATGGGTGAAGTTGTGCAGGCTCTTAAGTTAATATACAACGACTCAGATGAGACTTGTGGAGATTACTGTAGTCAGAAGGACTCCTCTGCTCGGGACTCTGATTTTAGAGGTGATCTTGTCCCTTCTGATAGCAGTTGGTGGAATGCTGGAGAGTTAACCCCTCGATTAACTTATGGGCAAGCATCATCCTTCATCACCATGGATTACAGTTCTGGTCCACTTGAAGAAATTGAAAACAGGCCGTTTTCAACTTCAAGCTTGATTGGAGATGAGATGTCTTTACCAATTAAGCATGGGAATAGATCAGGTCCCTTAAGAACAGTCAGAAGCAAGCTATCCTTACATAGATTTACAGGAAGCCGGAGTGAGCATGGGGGACCTTCTTCCAAGCGTCATTGGAATGATGTTTAA 2388 0.4523 MLFLPAPPAAALAMFAGGCLAGILRLFLSPDDAPCSRFRAWRERMPASLLFLIALLNLLFSCSVKSVSVSVSFASSERAKTWLVRPSSGPSSAPAPVPSPSPSYHGPIVTPSRKHRYHRHHHHSMRPYPVAPPPSKDQGCDQICADPLTPTPFGSPCGCVFPMKVRLSLGVSPYAVFPVMNELEIEVALGIYLEQSQVKIMGASADSQNQGRTVVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYAVVYITYPGISSSPPYPYGTITGGAPMESVGGNLPFSANLVNKNQKMNLRTIIIIASSSFVLLLVLVGAFSIILKCKKNRRPSSAVGLAFTSSLNKRSGLGSMLSSSITSSTSVSLMSTMAASILSVKTFSLPELEKATDKFSSKRVLGEGGFGRVYSGTFEDGTEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLLGICIEGRRRCLVYELVRNGSVESHLHGVDKIKGLLDWEARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPLLASREGLEQLVDPSLAGNYDFNDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDSDETCGDYCSQKDSSARDSDFRGDLVPSDSSWWNAGELTPRLTYGQASSFITMDYSSGPLEEIENRPFSTSSLIGDEMSLPIKHGNRSGPLRTVRSKLSLHRFTGSRSEHGGPSSKRHWNDV* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2602 795 Gene3D Phosphorylase Kinase; domain 1 366 470 - -
Dod01g2602 795 ProSiteProfiles Protein kinase domain profile. 395 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2602 795 MobiDBLite consensus disorder prediction 111 126 - -
Dod01g2602 795 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 49 793 - -
Dod01g2602 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Dod01g2602 795 MobiDBLite consensus disorder prediction 91 105 - -
Dod01g2602 795 SUPERFAMILY Protein kinase-like (PK-like) 375 669 IPR011009 -
Dod01g2602 795 MobiDBLite consensus disorder prediction 84 136 - -
Dod01g2602 795 CDD STKc_IRAK 401 670 - -
Dod01g2602 795 PANTHER OS01G0750732 PROTEIN 49 793 - -
Dod01g2602 795 Gene3D Transferase(Phosphotransferase) domain 1 471 692 - -
Dod01g2602 795 MobiDBLite consensus disorder prediction 775 795 - -
Dod01g2602 795 Pfam Protein tyrosine and serine/threonine kinase 397 667 IPR001245 GO:0004672|GO:0006468
Dod01g2602 795 ProSitePatterns Protein kinases ATP-binding region signature. 401 423 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2602 Dod-Chr1 65249779 65256795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2602 143 787 Receptor kinase-like Gene Family AT5G56890 54.381 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dod01g2602 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2602 - - gmx:100792309 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2602 01 65249779 65256795 Dod07g0751 07 10424627 10432473 PCT