Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2590 ATGGAAGCACAAAACAGAAACAAAGGCAAAGGCCGAATGGCACCTCAAAACTCAGACGCACAATTGACAGCACTTGTTGTAGATGACGACAGACAAGTTCGAATGATTCACCAAAGGATGTTGAACAGAGTTGGAGTGAAGAATACTGACGCAGTGGAAAATGGCAAAGAAGCCGTCGATGTTCATTGCTCTGGTCAAAGGTTTGATCTGATTCTCATGGACAAGGAAATGCCTGTGATGTGTGGCACTGAGGCAACGAAGAAACTCCGGTCAATGGGCATTGGTAGCATGATTGTTGGTGTGTCATCAAGCTCTATTGAAGCAGAAATACGAGAATTTGTGGATGCGGGACTGGATGACTACCTATTGAAACCCTTAAACATTGATAGGCTTTCTTCAATTCTTGATAAGATCAAGTGA 420 0.4333 MEAQNRNKGKGRMAPQNSDAQLTALVVDDDRQVRMIHQRMLNRVGVKNTDAVENGKEAVDVHCSGQRFDLILMDKEMPVMCGTEATKKLRSMGIGSMIVGVSSSSIEAEIREFVDAGLDDYLLKPLNIDRLSSILDKIK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2590 139 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 138 - -
Dod01g2590 139 CDD REC_hyHK_CKI1_RcsC-like 25 135 - -
Dod01g2590 139 ProSiteProfiles Response regulatory domain profile. 23 139 IPR001789 GO:0000160
Dod01g2590 139 Pfam Response regulator receiver domain 25 135 IPR001789 GO:0000160
Dod01g2590 139 SMART REC_2 22 135 IPR001789 GO:0000160
Dod01g2590 139 Gene3D - 2 139 - -
Dod01g2590 139 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 138 - -
Dod01g2590 139 SUPERFAMILY CheY-like 22 138 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2590 Dod-Chr1 65165605 65167235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2590 22 138 Response Regulator Gene Family AT3G04280 42.857 3.64e-22 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod01g2590 Response_reg 1.1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2590 - - var:108322984 159.844