Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2580 ATGAAGAAGAAGAAGAACAAGATGCAAATGAAAACCAAGTTTTTCATCATCTTCTTCTGTTACATTGGCTGTTTCTCTGACGGTTTTGCTGCTGCTGTAACAAATGATGAAGTATCTGCATTGCTTTCTATAAAAGCAGGTCTCCATGATCCCTTGAACAACCTGCAGGATTGGAAATTGGATACAGCTCACTGTAGCTGGACTGGTGTATGGTGCAACTCAGCTGGAGCTGTGGAGAAGCTTGATCTCTCCCACAAGAATCTCAGTGGCACCATATCCAATGATATACAAAGGCTGAGGAGTCTCACATCTCTGAACTTGTGCTGCAATTCTTTTGCAACACCATTGCCAAAATCCATAGCCAATCTCACCACACTGAAGAGTCTTGATGTGAGCCAGAACTTCTTCACTGGTGACTTCCCATTAGGTCTTGGAAGGGCGTGGCGACTTATGAGTTTGAATGCATCCAGCAATGAGTTCACAGGTTCTCTTCCGGCGGATCTTGGAAATGCATCTTCCTTAGAGATGCTGGATCTCAGAGGCAGCTTCTTTGAAGGGTCAGTTCCAATTTCATTCAGCAACTTGCTTAAGATGAAATTCCTTGGTCTATCAGGGAATAATCTCACTGGGAGAATTCCTGGGGAGCTGGGAGAACTTTCATCACTTGAGTATATGATACTTGGTTACAATGAATTTGATGGTGGGATTCCAGCAGAGTTTGGAAACCTCACCAATCTTAAGTATCTTGATTTGGCAGTAGCCAATCTTAGTGGTCAGATTCCATGTACATTGGGAAAGCTCAAGTCACTGGATACAATTTTCTTATACAACAACAATTTTGAAGGCAGAGTTCCACCAGAAATTGGCAACATGACTTCTTTGCAATTGCTGGATCTCTCTGATAACATGTTGTCCGGAAAAATTCCAGCTGAAATAAGTCAGCTGAGGAACTTGGAGCTTCTAAACTTCATGGGCAACAACCTATCTGGCCCTGTGCCTTCTGGCATTGGGGATTTGCCACAACTGCAGGTGCTTGAGCTGTGGAACAATTCCTTGTCAGGGCCATTGCCTAGTAACCTTGGCAAGAATTCACCATTGCAATGGTTGGATGTATCATCCAATTCACTCTCTGGTGAGATTCCAGAAACTCTTTGCAGCCAAGGCAATCTCACCAAGCTCATACTTTTCAACAATGCCTTCTCTGGTCAAATTCCAGCAAGCCTGTCTGCATGTCCTTCACTTGTTCGTGTTCGAATTCAGAATAACTTTCTTTCTGGGACAGTACCTGTAGGTTTTGGTAAGCTTGAGAAGCTTCAAAGGTTAGAATTGGCTAATAATAGTCTCACTGGTGGAATTCCTGATGACATTGCTTCTTCCACATCCCTTTCTTTCATTGATCTCTCAAGAAACAAACTCTATTCTTCTCTTCCTTCCACTATTCTTTCAATTCCAAACCTGCAAGCTTTCATGGTCTCCAACAACAACTTGGAAGGTGAAATCCCAGACCAATTCCAGGACTGTCCTTCACTTACAATTCTTGACCTCTCATCAAATCATTTCTCTGGAAGCATTCCAGCAAGCATTGCTTCTTGTCAAAAATTGGTAAATTTGAACCTAAGAAGCAACCAATTGGCTGGTGAAATACCAAAAGCAATAGCTAACATGCCTACATTGGCCATTCTTGACCTTTCCAACAACTCTCTGACTGGTCAAATACCTGAGAGCTTTGGTGTTTCCCCAGCTCTGGAATCATTCAATGTTTCATACAACAAGCTTGAAGGTCCTGTCCCAGCAAATGGCATGCTAAGAACTATAAACCCGAATGATCTGGTGGGCAATGCTGGCCTATGTGGTGGTGTCCTACCTCCATGTGGCCTAAACTCAGCATATTCATCAAGACATGGGAGCTCACATGCAAGGCACATTATTACAGGATGGATCATTGGAATATCATCAATCCTAGCCATTGGCATTGCAATTTTGGTAGCAAGATCTATACACATGAGGTGGTACACTGACGGTTTCTGCTTCCAAGAAAGATTTTATAAGGGTAGCAATGGGTGGCCGTGGAGGTTGATGGCATTTCAGAGGCTTGGTTTTACAAGCACTGACATTCTAGCTTGCATCAAGGAAACTAATGTGATTGGCATGGGAGCTACTGGGGTTGTTTATAAGGCTGAGATACTGCAATCAAGTACTATTGTGGCAGTGAAAAAATTGTGGCGATCAGGATCTGATATTGAAGTGGGAAGCAGTGATGACCTTGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGGCACAGGAACATTGTTAGACTATTAGGATTTCTTCACAATGACACTGATGTGATGATAGTTTATGAATATATGCACAATGGCAACCTTGGAGATGCCTTGCATGAATATGGGTTTGCCTTTAAGGTGGATGAAAAGATTGATGTTTACAGCTATGGAGTAGTTTTGTTTGAGCTTCTCACAGGGAAGAGGCCAACAGATCAGGACTTTGGAGAGTCTGTAGACATTGTAGAGTGGATTAGAAGGAAGATTAGAGATAACAAATCTCTAGAAGAAGCACTAGACCCCAATGTAGGTAACTGCAGGCATGTACTAGAAGAGATGCTTTTAGTGCTAAGAATAGCACTTCTTTGCACTGCCAAGCTCCCCAAGGACAGACCAACCATGAGGGATGTCATAATGATGCTTGAAGAGGCAAAGCCACGGAGAAAGAGCAGTAGCAACAATGAAACATGTGCAGCTAACAACATGGAGATGCCAGTTTTTAGCCCATCACCAGTTAATGGCCTTGTGTAG 2811 0.4294 MKKKKNKMQMKTKFFIIFFCYIGCFSDGFAAAVTNDEVSALLSIKAGLHDPLNNLQDWKLDTAHCSWTGVWCNSAGAVEKLDLSHKNLSGTISNDIQRLRSLTSLNLCCNSFATPLPKSIANLTTLKSLDVSQNFFTGDFPLGLGRAWRLMSLNASSNEFTGSLPADLGNASSLEMLDLRGSFFEGSVPISFSNLLKMKFLGLSGNNLTGRIPGELGELSSLEYMILGYNEFDGGIPAEFGNLTNLKYLDLAVANLSGQIPCTLGKLKSLDTIFLYNNNFEGRVPPEIGNMTSLQLLDLSDNMLSGKIPAEISQLRNLELLNFMGNNLSGPVPSGIGDLPQLQVLELWNNSLSGPLPSNLGKNSPLQWLDVSSNSLSGEIPETLCSQGNLTKLILFNNAFSGQIPASLSACPSLVRVRIQNNFLSGTVPVGFGKLEKLQRLELANNSLTGGIPDDIASSTSLSFIDLSRNKLYSSLPSTILSIPNLQAFMVSNNNLEGEIPDQFQDCPSLTILDLSSNHFSGSIPASIASCQKLVNLNLRSNQLAGEIPKAIANMPTLAILDLSNNSLTGQIPESFGVSPALESFNVSYNKLEGPVPANGMLRTINPNDLVGNAGLCGGVLPPCGLNSAYSSRHGSSHARHIITGWIIGISSILAIGIAILVARSIHMRWYTDGFCFQERFYKGSNGWPWRLMAFQRLGFTSTDILACIKETNVIGMGATGVVYKAEILQSSTIVAVKKLWRSGSDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLHNDTDVMIVYEYMHNGNLGDALHEYGFAFKVDEKIDVYSYGVVLFELLTGKRPTDQDFGESVDIVEWIRRKIRDNKSLEEALDPNVGNCRHVLEEMLLVLRIALLCTAKLPKDRPTMRDVIMMLEEAKPRRKSSSNNETCAANNMEMPVFSPSPVNGLV* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2580 936 Pfam Leucine rich repeat 412 472 IPR001611 GO:0005515
Dod01g2580 936 Pfam Leucine rich repeat 484 544 IPR001611 GO:0005515
Dod01g2580 936 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Dod01g2580 936 SUPERFAMILY RNI-like 284 594 - -
Dod01g2580 936 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Dod01g2580 936 Gene3D Transferase(Phosphotransferase) domain 1 701 803 - -
Dod01g2580 936 PANTHER UNNAMED PRODUCT 801 915 - -
Dod01g2580 936 SMART LRR_typ_2 339 363 IPR003591 -
Dod01g2580 936 SMART LRR_typ_2 483 506 IPR003591 -
Dod01g2580 936 SMART LRR_typ_2 507 531 IPR003591 -
Dod01g2580 936 SMART LRR_typ_2 435 459 IPR003591 -
Dod01g2580 936 SMART LRR_typ_2 555 579 IPR003591 -
Dod01g2580 936 SMART LRR_typ_2 195 219 IPR003591 -
Dod01g2580 936 SMART LRR_typ_2 99 123 IPR003591 -
Dod01g2580 936 SMART LRR_typ_2 291 315 IPR003591 -
Dod01g2580 936 Gene3D Ribonuclease Inhibitor 336 631 IPR032675 -
Dod01g2580 936 ProSiteProfiles Protein kinase domain profile. 709 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2580 936 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 800 - -
Dod01g2580 936 ProSitePatterns Protein kinases ATP-binding region signature. 715 739 IPR017441 GO:0005524
Dod01g2580 936 Gene3D Ribonuclease Inhibitor 197 268 IPR032675 -
Dod01g2580 936 Gene3D Ribonuclease Inhibitor 269 335 IPR032675 -
Dod01g2580 936 PANTHER UNNAMED PRODUCT 14 800 - -
Dod01g2580 936 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 801 915 - -
Dod01g2580 936 SUPERFAMILY Protein kinase-like (PK-like) 709 906 IPR011009 -
Dod01g2580 936 Pfam Leucine Rich Repeat 559 577 IPR001611 GO:0005515
Dod01g2580 936 Pfam Protein kinase domain 711 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2580 936 Gene3D Transferase(Phosphotransferase) domain 1 804 909 - -
Dod01g2580 936 SUPERFAMILY L domain-like 58 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2580 Dod-Chr1 65017466 65020907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2580 752 936 Receptor kinase-like Gene Family AT1G08590 50.538 1.13e-47 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod01g2580 Pkinase 4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2580 - - gmx:100811284 1350.5