Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2573 ATGGCACCGAATCCAAAGGTTGTAGCAGCCTATCGTGCAATGGCAAGTCTTGGGATTCATGAATCAAAAGTGAAACCGGTATTAAAGAAACTCCTTAAGTTGTATGATAAAAACTGGGAGCTTATTGAAGAAGAAAACTACAGAGCTCTGGCAGATGCAATATTTGAGGAGGATGAGGTGCCAGAGCAGGACCCACAACAGAAAAGCAATAGAGTTGATGAACAAGAGTTAGATGATGAAGAAGCTCATGTACAAGATGTGCCATTGCAACCTAAGAAGAGGTTGCGTTTAAGAGGCCAAATGGTTCAGTCCTCACATCCTCAGACTAGCTGTGGTCCCAGTGCAGCTGCTTCTCCATTGAAAATACCTAAATTAGAAGATAACGCAGTACCTGAAAATAGTTCCAGACTGCAGCCTCAACATTCAGCAGTGTTATCTGATGGAAATGGAAGGATTGAAGCTCATCAAGTTCCATCACAAGATGGCATTGTCGATAAGGGCAAGCAACCTGTATCACCTCAAGTCACTCCTAGAGGGAGAAGATTTACATCTCCATCTGCAGTACCATTTAAAGAACCAATGGTTGAACTAGGAACCACTTTGTTGCCGAACAACAAACTGTCTCATCCTCTTGCTTTGATCAAGCCCAAGGATGAGCCTATCGACAACATGCCAGATTATGAGGCTCCCATTTCAGTGATTCCTCCTGAACCACCTAGTGGAGGGGTATCTTCTACGATGAATGGTGCAGCTGGACAGCAAGATGGCTATGACACCATGGCATTACAATGCAGAGATGAAGACGTTGGTGGTGAAGATAATATTCATTCCTCAAATGAACCTTTGACTTCTAATATGGAGATAGCCTCGTCACCTATGGGAGAGGAAGGACCTGTAAATATAACACCAACTGTTGGCATGCCCCAGGAATCTGAGGCACATGGCACTCTGATTGTTGGAGGAAATAAAGATTCTGTCATGCCTCTCTGCACTTCAAATGGATCAATCAATGTTAAGTCATCTTCTTCCTTGGTTGCTCCTGAAATTCCAGTCTCATCAGCCTGCCCAAGTGGTCTGGATGATGCTGTAATAGTTTCCCAGATGGTTGAAAATGACGATGTCCTGGCAAGTGACGACAGGAAGGAGCCACAGGATGCTTTATCTCCAAATTCACATAGTTTAATGGCTGTTCCAAAGCATCAGCTTTCAACTAATGATGTAACAACTGTTCACGATGTTAATGACCTAACAAAGGGAGAAGAAAGAGTGAAAATTTCTTGGGTGAATAACATTACTGATGACTTTCCACCATCCTTTCACTACATACCTCGAAACCTTGTCTTCCAAAATGCTTATGTTAATCTTTCTCTTTCTCTTATTGGGAATGAGGATTGTTGTTCGACTTGTATGGGCAATTGTGTCTTGTCTTCTAAACCATGTTCTTGTGCAAATAAAACTGGGGGTGGATTTGCTTACACTGCCCAGGGCCTACTGAAGGAAGAGTTCTTGGAAGAGTGTATTGCCATCAGTGGCAATCCTAAAAATTATTTCTATTGCAATGACTGCCCGCATGAAAGATCAAAGAATGATGATTGTTTAGAACCATGTAAAGGACACTTGAGGAGGAAGTTTATTAAAGAGTGCTGGAGTAAATGTGGCTGTGGGAAGAACTGTGGCAATCGGGTTGTCCAGCGAGGAATAACTTGCAACCTGCAGGTGTTTCTAACATCAGAAGGAAAAGGGTGGGGTCTACGGACCTTACAGGAGCTTCCAAAAGGTGCATTTGTATGTGAGTTCGTTGGGGAAATTTTGACCGTCAAAGAGTTGCACGAGAGGAACTTAAAATATCCCAAAAATAGGAAATATACATATCCAATTCTATTGGATGCAGATTGGGAGTCAGCAAATGTGAAGGATAAAGAAGCTCTCTGCTTGTATGCAGCGTCTTATGGAAATGCTGCTAGGTTTATTAATCACAGATGTTTGGATGCTAACTTGGTTGACATCCCAGTTGAAGTTGAGGGCCCAGATCATCACTACTATCATTTTGCTTTCTTTACATCCAGAGAAGTAGCAGCACAGGAAGAACTCACTTGGGATTATGGCATAAACTTTGATGACCATGATCAGCCTGTTGAGCTGTTTGGATGCAAATGTGGAAGTAAATTCTGCAGGAATATGAAGCGATCAAATAGGTCCACTAGATCGCCAGTTGCAAAATGA 2223 0.4247 MAPNPKVVAAYRAMASLGIHESKVKPVLKKLLKLYDKNWELIEEENYRALADAIFEEDEVPEQDPQQKSNRVDEQELDDEEAHVQDVPLQPKKRLRLRGQMVQSSHPQTSCGPSAAASPLKIPKLEDNAVPENSSRLQPQHSAVLSDGNGRIEAHQVPSQDGIVDKGKQPVSPQVTPRGRRFTSPSAVPFKEPMVELGTTLLPNNKLSHPLALIKPKDEPIDNMPDYEAPISVIPPEPPSGGVSSTMNGAAGQQDGYDTMALQCRDEDVGGEDNIHSSNEPLTSNMEIASSPMGEEGPVNITPTVGMPQESEAHGTLIVGGNKDSVMPLCTSNGSINVKSSSSLVAPEIPVSSACPSGLDDAVIVSQMVENDDVLASDDRKEPQDALSPNSHSLMAVPKHQLSTNDVTTVHDVNDLTKGEERVKISWVNNITDDFPPSFHYIPRNLVFQNAYVNLSLSLIGNEDCCSTCMGNCVLSSKPCSCANKTGGGFAYTAQGLLKEEFLEECIAISGNPKNYFYCNDCPHERSKNDDCLEPCKGHLRRKFIKECWSKCGCGKNCGNRVVQRGITCNLQVFLTSEGKGWGLRTLQELPKGAFVCEFVGEILTVKELHERNLKYPKNRKYTYPILLDADWESANVKDKEALCLYAASYGNAARFINHRCLDANLVDIPVEVEGPDHHYYHFAFFTSREVAAQEELTWDYGINFDDHDQPVELFGCKCGSKFCRNMKRSNRSTRSPVAK* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2573 740 MobiDBLite consensus disorder prediction 101 115 - -
Dod01g2573 740 Pfam Pre-SET motif 417 561 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod01g2573 740 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 738 - -
Dod01g2573 740 MobiDBLite consensus disorder prediction 157 186 - -
Dod01g2573 740 SMART preset_2 413 553 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod01g2573 740 Pfam SET domain 581 702 IPR001214 GO:0005515
Dod01g2573 740 MobiDBLite consensus disorder prediction 58 93 - -
Dod01g2573 740 Gene3D SET domain 395 713 IPR046341 -
Dod01g2573 740 SUPERFAMILY SET domain 423 725 IPR046341 -
Dod01g2573 740 SMART set_7 569 708 IPR001214 GO:0005515
Dod01g2573 740 CDD SET_SETDB-like 437 702 - -
Dod01g2573 740 ProSiteProfiles Pre-SET domain profile. 465 566 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod01g2573 740 MobiDBLite consensus disorder prediction 58 119 - -
Dod01g2573 740 Pfam Ubiquitin-binding WIYLD domain 6 59 IPR018848 GO:0018024
Dod01g2573 740 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 740 IPR025776 -
Dod01g2573 740 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 738 - -
Dod01g2573 740 Gene3D - 1 59 IPR043017 -
Dod01g2573 740 ProSiteProfiles SET domain profile. 569 702 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2573 Dod-Chr1 64928612 64937640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2573 415 725 Su(var)3-9 homologs AT1G73100 31.003 6.82e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod01g2573 Pre-SET 5.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2573 - - gmx:100809678 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1636 06 22174219 22184544 Dod01g2573 01 64928612 64937640 PCT