Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2569 ATGCATGCTGCACGAGACATAACAACTTTCAAAATGGCTCATGCTATTCTCTTTCATATACTCCTGATATCCTTGCTTCCATTGAAAATCACAGCATCACCAAGGACAGAAGCAGAAGCCCTTATCAAATGGAAAAACAGTCTATCAAATCCTCTTCCTTCTTCTCTCAACTCATGGTCCCTCAACAACATTGGCAACCTTTGCAGCTGGGATGCCATTGTTTGTGACAAAACAAACACAACAGTGTCAGAGATAGACCTCTCTGGTGCCAATCTCAATGGGACCCTCAATGCCCTGGATTTTGATTCCCTCCCAAATCTCACTCACCTCGACCTCAATGGTAACAGTTTTGGTGGGTCATTACCATCCGCAATTGGCAACCTTTCCAAGCTCACTTTCTTGGACTTGGGAAACAACCTTTTTGGAGACACACTGCCTTCTGAGCTAGGCCAGTTAAGGGAGCTTCAGTATCTCAGCTTTTTCAACAACAGTTTCAACGGTACCATTCCTTCTCAGCTCACAAATCTCTCCAAGGTAGGGCACCTGGACTTTGGATCAAACTACTTTATATCTCCTCCTGACTGGTCTCAGTATTCAGGCATGCCTTCTTTAACATACGTTGGCTTGGCTATGAATTGGTTCACTTCTGAATTCCCAAGTTTCATACTGGAGTGCCACAACTTGACTAACCTTGACCTCTCCCAGAATAATTTCAACACCACAATACCAGAATCCATGTATACAAAATTGGTCAAGCTTGAATACCTCAACCTCACAAACTGTGGGCTGGAAGGACCCTTGTCATCCAACTTGTCCAAGCTCTCAAATCTCAAAGAACTTCGTATAGGTAACAACAAGTTTACTGGTCCTATTCCCTCAGACATAGGATTGATATCTGGCCTTCAATTTCTTGAATTGAATAGCATTTCCGCCCATGGAAATATTCCTTCCTCCCTTGGCCAACTAAGGGAGCTGAGGCGTCTTGACCTCCGTGATAATTTTTTGAACTCTTCAATCCCTTCTGAGCTTTGCCAATGCATAAATCTAACCTTCATTAGTTTAGCAGCCAATAATCTGACTGGTCCTTTGCCTTTATCATTATCTAATCTGACCAAGCTGACAGATTTGGGATTATCAGAAAATTCCATTTCTGGTCAAATTTCTGCCTTGCTGATCTCTAGCTGGACTCAATTGACATCTCTGCAAGTCCAAAACAATAACTTCACGGGAAACCTTCCTCCAGAGATTGGCCTGTTGAAAAAAATTAATATCCTATTTCTGTACAATAATCAGTTCTCTGGTCCTATTCCTGTAGAGATTGGAAACCTGAAGGTAATTACACAGTTAGACCTTTCAGGAAACAACTTCTCTGGTCCAATCCCTCCAACCATTTGGAATCTTACAAGCATTACAATTATGAATCTTTTCTTCAATGAGCTCTCTGGAGCCATTCCGAGGGATATTGGAAACTTAAACTCACTGCAAGTTTTCGATGTCAACAGTAATAATTTGGTTGGAGAGCTGCCAGACACCATAGCTCAACTAACCACTTTAACACATTTTTCTGTGTTCACCAACAACTTCTCGGGCAGTATTACCAGAGATTTTGGAAAGAATAGTCCTAATTTGACTACCGTCTTCCTTTCAAACAACAGCTTCTCAGGAGAACTGCCACCTGACTTGTGCAGTGGTGTAATGCTAACTAGTTTGGCAGTCAATAACAACAGCTTTTCTGGGCCTTTGCCAAAGTCCTTGAGAAATTGTTCAGCACTAACTAGAGTTAGGCTTGATGACAATCAATTCTCTGGAGACATCACAGAAGTATTTGGGGTCTACCCAAGTCTTGTTTTTATCTCACTAAGTGGGAATCAGCTTAGTGGTGAGCTCTCCCCTATGTGGGCTAAATGTGTCAATTTAACCGAGATGGAAATGAGTAGAAACAAACTTTCAGGAAAAATCCCATCTGAGCTGAGTATGTTGAGTCAATTACAGTATCTAAGTCTGCACTCCAATAAATTCACAGGCAATATCCCGCCTGAAATGGGAAATATAAGCAAGCTCTTCATGTTCAACTTGAGCAGGAACCATTTCTCAGGAGAAATTCCCCAGAGTATTGGCAGATTGGCTCATCTTAAAGAGCTTGATTTATCAGATAACAACTTCAGTGGAAGCATTCCTAAAGAGCTTGGTGATTGTCATGAGTTACAGAGCCTGAATTTAAGCCATAACAATCTATCAGGGGAAATACCATCTGAACTTGGCAATCTGTTCTCTCTCCAATACTTTTTGGACCTCAGCAGCAACTCTCTTTCAGGGAAGATTCCTCAAAACCTTGAAAAGCTTGAATCATTGGAGGTTCTCAATGTTTCACACAACCATCTGTCAGGTGCAATCCCAAAATCCTTGTCAGACATGCTCAGCCTTGAATCTGTTGACTTTTCTTACAACAACTTGGCTGGTCCGGTCCCAGCTTTTGATAATTCCCAAATAGCAAATGGAGAAGCCTATGCTGGGAACCCTGCTTTGTGTGGTGAGGTTACAGGTGTACACCATTGCTCCAGTGACAAATCCAGAAGAGTTAACAAAAAAGTTCTTCTTGGCGTTATTATACCGGTTTGTGGGTTACTACTCGGGATGTTTTGTGTTGGAATCCTTGTATTACGGTGGCAACCCAAGCTCCTTGATGAAGAGTCCAGAAGCATTCAAGACAATGATCAACCTATTAGAATGGTATGGGGAAGAGATGGAGAATTCACGTTTGCTGAATTTGTCAAGGCCACCAATGACTTCAATGACAAGTACTGCATTGGAAAAGGAGGATTTGGAAGCGTTTATAGAGCAGAACTACCAACAGGTCAAGTTGTTGCTATCAAAAGGCTCAATATTACAGACTCTAATGACATCCCAGCAGTGAACCGCCAAAGTTTTGAGAATGAGATAAGAACACTTACAGGAGTAAGGCACCGCAATATAATCAGGCTTTATGGATTCTGTTCCAGGAGGAGACAAATGTTCTTGGTCTATGAGTATGTAGACAGAGGAAGCTTACGGAAAGTCCTATATGGAGAGGAAAGAACGTTGGAGCTAGGATGGGCCAAAAGGTTGAAAATTGTGCAGGGAATAGCACATGCAGTTGCCTACCTGCACAGTGATTGCTCCCCACCAGTTGTGCACAGAGATATAACACTGAATAACATACTGCTGGACTCAGACTTTGAACCCCGTCTTGCAGATTTTGGCACTGCAAAGCTGTTAAGTTCCAACACTTCAAGTTGGACCTCAGTTGCTGGTTCTTATGGCTACATGGCTCCAGGTAAACACTCAAACCAATTTTAG 3336 0.4221 MHAARDITTFKMAHAILFHILLISLLPLKITASPRTEAEALIKWKNSLSNPLPSSLNSWSLNNIGNLCSWDAIVCDKTNTTVSEIDLSGANLNGTLNALDFDSLPNLTHLDLNGNSFGGSLPSAIGNLSKLTFLDLGNNLFGDTLPSELGQLRELQYLSFFNNSFNGTIPSQLTNLSKVGHLDFGSNYFISPPDWSQYSGMPSLTYVGLAMNWFTSEFPSFILECHNLTNLDLSQNNFNTTIPESMYTKLVKLEYLNLTNCGLEGPLSSNLSKLSNLKELRIGNNKFTGPIPSDIGLISGLQFLELNSISAHGNIPSSLGQLRELRRLDLRDNFLNSSIPSELCQCINLTFISLAANNLTGPLPLSLSNLTKLTDLGLSENSISGQISALLISSWTQLTSLQVQNNNFTGNLPPEIGLLKKINILFLYNNQFSGPIPVEIGNLKVITQLDLSGNNFSGPIPPTIWNLTSITIMNLFFNELSGAIPRDIGNLNSLQVFDVNSNNLVGELPDTIAQLTTLTHFSVFTNNFSGSITRDFGKNSPNLTTVFLSNNSFSGELPPDLCSGVMLTSLAVNNNSFSGPLPKSLRNCSALTRVRLDDNQFSGDITEVFGVYPSLVFISLSGNQLSGELSPMWAKCVNLTEMEMSRNKLSGKIPSELSMLSQLQYLSLHSNKFTGNIPPEMGNISKLFMFNLSRNHFSGEIPQSIGRLAHLKELDLSDNNFSGSIPKELGDCHELQSLNLSHNNLSGEIPSELGNLFSLQYFLDLSSNSLSGKIPQNLEKLESLEVLNVSHNHLSGAIPKSLSDMLSLESVDFSYNNLAGPVPAFDNSQIANGEAYAGNPALCGEVTGVHHCSSDKSRRVNKKVLLGVIIPVCGLLLGMFCVGILVLRWQPKLLDEESRSIQDNDQPIRMVWGRDGEFTFAEFVKATNDFNDKYCIGKGGFGSVYRAELPTGQVVAIKRLNITDSNDIPAVNRQSFENEIRTLTGVRHRNIIRLYGFCSRRRQMFLVYEYVDRGSLRKVLYGEERTLELGWAKRLKIVQGIAHAVAYLHSDCSPPVVHRDITLNNILLDSDFEPRLADFGTAKLLSSNTSSWTSVAGSYGYMAPGKHSNQF* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2569 1111 Gene3D Ribonuclease Inhibitor 512 855 IPR032675 -
Dod01g2569 1111 PRINTS Leucine-rich repeat signature 781 794 - -
Dod01g2569 1111 PRINTS Leucine-rich repeat signature 735 748 - -
Dod01g2569 1111 PANTHER OS01G0515300 PROTEIN 13 188 - -
Dod01g2569 1111 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 188 - -
Dod01g2569 1111 Gene3D Phosphorylase Kinase; domain 1 894 1010 - -
Dod01g2569 1111 ProSiteProfiles Leucine-rich repeat profile. 734 756 IPR001611 GO:0005515
Dod01g2569 1111 PANTHER OS01G0515300 PROTEIN 119 220 - -
Dod01g2569 1111 PANTHER OS01G0515300 PROTEIN 663 1104 - -
Dod01g2569 1111 PANTHER OS01G0515300 PROTEIN 153 345 - -
Dod01g2569 1111 SUPERFAMILY L domain-like 340 532 - -
Dod01g2569 1111 PANTHER OS01G0515300 PROTEIN 614 775 - -
Dod01g2569 1111 Pfam Protein kinase domain 932 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2569 1111 SUPERFAMILY RNI-like 525 821 - -
Dod01g2569 1111 SUPERFAMILY Protein kinase-like (PK-like) 913 1104 IPR011009 -
Dod01g2569 1111 PANTHER OS01G0515300 PROTEIN 294 668 - -
Dod01g2569 1111 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 294 668 - -
Dod01g2569 1111 SMART LRR_typ_2 660 684 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 491 515 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 708 732 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 733 756 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 128 152 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 322 346 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 781 805 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 443 467 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 104 127 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 225 249 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 541 564 IPR003591 -
Dod01g2569 1111 SMART LRR_typ_2 274 298 IPR003591 -
Dod01g2569 1111 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Dod01g2569 1111 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 119 220 - -
Dod01g2569 1111 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 663 1104 - -
Dod01g2569 1111 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 153 345 - -
Dod01g2569 1111 Gene3D Ribonuclease Inhibitor 34 195 IPR032675 -
Dod01g2569 1111 Pfam Leucine Rich Repeat 252 274 IPR001611 GO:0005515
Dod01g2569 1111 Pfam Leucine Rich Repeat 106 128 IPR001611 GO:0005515
Dod01g2569 1111 Pfam Leucine Rich Repeat 783 803 IPR001611 GO:0005515
Dod01g2569 1111 ProSitePatterns Protein kinases ATP-binding region signature. 936 958 IPR017441 GO:0005524
Dod01g2569 1111 Gene3D Ribonuclease Inhibitor 196 511 IPR032675 -
Dod01g2569 1111 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 614 775 - -
Dod01g2569 1111 Gene3D Transferase(Phosphotransferase) domain 1 1011 1110 - -
Dod01g2569 1111 Pfam Leucine rich repeat 689 745 IPR001611 GO:0005515
Dod01g2569 1111 SUPERFAMILY L domain-like 56 386 - -
Dod01g2569 1111 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1056 1068 IPR008266 GO:0004672|GO:0006468
Dod01g2569 1111 ProSiteProfiles Protein kinase domain profile. 930 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2569 Dod-Chr1 64892948 64897966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2569 370 823 Receptor kinase-like Gene Family AT4G08850 31.938 6.95e-62 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod01g2569 Pkinase 5.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2569 - - gmx:100809137 1568.13