Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2537 ATGGTTGACAAGGCTGTTGCTCTTTTGGCAAACCTGTCAACAATTGCTGAGGGTCGATTAGAAATAGCAAGGGAAGGGGGCATTCCCTTACTAGTTGAAATTGCTGAGTCAGGTTCTCAGAGGGGAAAGGAAAATGCTGCTTCCATTCTCTTGCAACTGTGTCTTCACAAGTCCCAAGTTTTGTACCCTTGTTCTGCAAGAAGGAGCAGTGCCACCCCTAGTTGCGTTATCTCAGTCTGGTACACCGAGAGCAAGGGAAAAGGTCGAGGATCTAATCATCATTTGTTATTGCCATCTATGTTGATTGTTTAA 312 0.4487 MVDKAVALLANLSTIAEGRLEIAREGGIPLLVEIAESGSQRGKENAASILLQLCLHKSQVLYPCSARRSSATPSCVISVWYTESKGKGRGSNHHLLLPSMLIV* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2537 103 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 1 59 - -
Dod01g2537 103 PANTHER U BOX DOMAIN-CONTAINING 1 59 - -
Dod01g2537 103 Gene3D - 1 73 IPR011989 -
Dod01g2537 103 SUPERFAMILY ARM repeat 4 59 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2537 Dod-Chr1 64507411 64507722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2537 1 56 U-box Gene Family AT3G54790 78.571 6.92e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2537 - - mtr:MTR_1g069845 102.834