Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2523 ATGGAAAAGGATTTATTAGAGGAAAAGAAAGTGAAGGAAGGGGAACCAAAGGAAACAAGGTACAGAGGAGTAAGGAGGAGGCCATGGGGGAAGTTTGCTGCAGAGATAAGGGATTCAACAAGGCATGGAGCAAGAGTGTGGCTTGGTACTTTCAACACTGCAGAGGAGGCTGCAAGAGCTTATGATCGTGCTGCCTTTGGGATGAGAGGTACCTCGGCCATTCTTAACTTTCCTAATGAATATCCTTCATGCAATGTCAATGTGATTTCTTCTTCTTCATCAACATCTTCAAGTGTAGCTAAGACGACCGAGCTTGGTAATAAACAAGTTCTGGAGTTTGAGTGTTTGGATGACAAGTTGTTAGAGGAACTCTTAGATTGTGATGAGAATTCCATCAACAAAAACAGAAACTTGAATCACGAGGACTTTTGGACTTAG 438 0.4247 MEKDLLEEKKVKEGEPKETRYRGVRRRPWGKFAAEIRDSTRHGARVWLGTFNTAEEAARAYDRAAFGMRGTSAILNFPNEYPSCNVNVISSSSSTSSSVAKTTELGNKQVLEFECLDDKLLEELLDCDENSINKNRNLNHEDFWT* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2523 145 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Dod01g2523 145 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Dod01g2523 145 CDD AP2 19 79 IPR001471 GO:0003700|GO:0006355
Dod01g2523 145 PANTHER OS09G0571700 PROTEIN 14 129 - -
Dod01g2523 145 MobiDBLite consensus disorder prediction 1 20 - -
Dod01g2523 145 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Dod01g2523 145 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Dod01g2523 145 Pfam AP2 domain 19 70 IPR001471 GO:0003700|GO:0006355
Dod01g2523 145 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Dod01g2523 145 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Dod01g2523 145 PANTHER DNA-BINDING DOMAIN 14 129 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2523 Dod-Chr1 64331906 64332777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2523 17 129 AP2-EREBP Transcription Factor Family AT3G23230 61.290 2.62e-43 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod01g2523 AP2 1.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2523 - - gmx:100800069 155.221